Magnesium in PDB 4hot: Crystal Structure of Full-Length Human IFIT5 with 5`-Triphosphate Oligoadenine

The structure of Crystal Structure of Full-Length Human IFIT5 with 5`-Triphosphate Oligoadenine, PDB code: 4hot was solved by Y.M.Abbas, A.Pichlmair, M.W.Gorna, G.Superti-Furga, B.Nagar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.43 / 2.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	54.627, 85.188, 60.651, 90.00, 106.34, 90.00
R / Rfree (%)	18 / 23.1

The binding sites of Magnesium atom in the Crystal Structure of Full-Length Human IFIT5 with 5`-Triphosphate Oligoadenine (pdb code 4hot). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Full-Length Human IFIT5 with 5`-Triphosphate Oligoadenine, PDB code: 4hot:

Magnesium binding site 1 out of 1 in the Crystal Structure of Full-Length Human IFIT5 with 5`-Triphosphate Oligoadenine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Full-Length Human IFIT5 with 5`-Triphosphate Oligoadenine within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:22.1 occ:1.00 O A:HOH603 1.9 36.5 1.0 O1A X:ATP1 2.1 36.2 1.0 OE2 A:GLU33 2.2 49.3 1.0 O2G X:ATP1 2.2 38.1 1.0 O A:HOH638 2.3 27.9 1.0 O X:HOH101 2.5 52.9 1.0 CD A:GLU33 3.2 42.5 1.0 O A:HOH632 3.3 72.1 1.0 PG X:ATP1 3.6 44.7 1.0 OE1 A:GLU33 3.6 41.9 1.0 PA X:ATP1 3.6 33.1 1.0 NZ A:LYS150 4.1 31.2 1.0 O3B X:ATP1 4.1 36.1 1.0 O1G X:ATP1 4.2 45.5 1.0 O3A X:ATP1 4.2 46.7 1.0 OD2 A:ASP334 4.3 48.5 1.0 O X:HOH102 4.3 58.6 1.0 O5' X:ATP1 4.4 44.5 1.0 CG2 A:THR37 4.5 36.4 1.0 CG A:GLU33 4.5 35.2 1.0 OG A:SER283 4.5 41.6 1.0 O2A X:ATP1 4.7 33.0 1.0 PB X:ATP1 4.7 31.6 1.0 O3G X:ATP1 4.7 46.8 1.0 C5' X:ATP1 4.8 41.2 1.0 N7 X:A2 4.8 32.4 1.0 O1B X:ATP1 4.8 30.7 1.0 OG1 A:THR37 4.9 37.5 1.0 C8 X:A2 4.9 29.9 1.0

Y.M.Abbas, A.Pichlmair, M.W.Gorna, G.Superti-Furga, B.Nagar. Structural Basis For Viral 5'-Ppp-Rna Recognition By Human Ifit Proteins. Nature V. 494 60 2013.
ISSN: ISSN 0028-0836
PubMed: 23334420
DOI: 10.1038/NATURE11783