Magnesium in PDB 4iee: Crystal Structure of the Large Terminase Subunit GP2 of Bacterial Virus SF6 Complexed with Atp-R-S

The structure of Crystal Structure of the Large Terminase Subunit GP2 of Bacterial Virus SF6 Complexed with Atp-R-S, PDB code: 4iee was solved by H.Zhao, T.Christensen, Y.Kamau, L.Tang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.75 / 1.89
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	57.101, 63.142, 149.491, 90.00, 90.00, 90.00
R / Rfree (%)	16.6 / 20.8

The binding sites of Magnesium atom in the Crystal Structure of the Large Terminase Subunit GP2 of Bacterial Virus SF6 Complexed with Atp-R-S (pdb code 4iee). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Large Terminase Subunit GP2 of Bacterial Virus SF6 Complexed with Atp-R-S, PDB code: 4iee:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Large Terminase Subunit GP2 of Bacterial Virus SF6 Complexed with Atp-R-S


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Large Terminase Subunit GP2 of Bacterial Virus SF6 Complexed with Atp-R-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:51.7 occ:1.00 O A:HOH986 2.1 37.4 1.0 O2G A:AGS502 2.1 55.0 1.0 O2B A:AGS502 2.1 29.4 1.0 O A:HOH949 2.2 39.0 1.0 OG A:SER29 2.3 31.4 1.0 O A:HOH847 2.6 43.9 1.0 CB A:SER29 3.2 27.6 1.0 PG A:AGS502 3.3 58.6 1.0 PB A:AGS502 3.3 29.3 1.0 O3B A:AGS502 3.5 30.5 1.0 OE2 A:GLU118 3.9 44.6 1.0 O A:HOH924 3.9 47.8 1.0 O3G A:AGS502 3.9 34.9 1.0 O2A A:AGS502 4.1 28.9 1.0 O3A A:AGS502 4.3 28.8 1.0 O1B A:AGS502 4.4 29.7 1.0 CA A:SER29 4.4 20.0 1.0 OE1 A:GLU118 4.5 48.9 1.0 N A:SER29 4.5 17.8 1.0 CD A:GLU118 4.5 45.0 1.0 PA A:AGS502 4.6 28.4 1.0 O1A A:AGS502 4.8 28.2 1.0 S1G A:AGS502 4.8 60.2 1.0

H.Zhao, T.E.Christensen, Y.N.Kamau, L.Tang. Structures of the Phage SF6 Large Terminase Provide New Insights Into Dna Translocation and Cleavage. Proc.Natl.Acad.Sci.Usa V. 110 8075 2013.
ISSN: ISSN 0027-8424
PubMed: 23630261
DOI: 10.1073/PNAS.1301133110