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Magnesium in PDB 4iok: N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo

Enzymatic activity of N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo

All present enzymatic activity of N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo:
6.3.4.3;

Protein crystallography data

The structure of N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo, PDB code: 4iok was solved by B.Stec, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 106.49 / 2.50
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 91.170, 212.976, 53.444, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 25.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo (pdb code 4iok). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo, PDB code: 4iok:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4iok

Go back to Magnesium Binding Sites List in 4iok
Magnesium binding site 1 out of 2 in the N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg604

b:34.0
occ:1.00
O1B A:ADP602 1.8 30.8 1.0
O1 A:XPO603 1.9 42.9 1.0
O A:HOH718 2.0 17.3 1.0
O A:HOH784 2.3 30.6 1.0
OE1 A:GLU301 2.4 35.8 1.0
OG1 A:THR75 2.4 24.6 1.0
PB A:ADP602 3.0 30.5 1.0
CD A:GLU301 3.4 36.9 1.0
CB A:THR75 3.4 22.4 1.0
P A:XPO603 3.4 39.3 1.0
O3B A:ADP602 3.5 33.1 1.0
OE2 A:GLU301 3.7 37.1 1.0
N A:THR75 3.8 24.5 1.0
NZ A:LYS74 3.8 30.2 1.0
O2B A:ADP602 4.0 33.8 1.0
NH2 A:ARG97 4.1 24.1 1.0
O2 A:XPO603 4.1 40.6 1.0
CA A:THR75 4.1 25.0 1.0
O3A A:ADP602 4.2 31.1 1.0
O2A A:ADP602 4.3 33.2 1.0
O4 A:XPO603 4.3 47.2 1.0
O3 A:XPO603 4.4 45.3 1.0
CB A:LYS74 4.4 28.8 1.0
PA A:ADP602 4.5 33.1 1.0
CG2 A:THR75 4.6 20.7 1.0
O1A A:ADP602 4.6 29.8 1.0
CG A:GLU301 4.7 35.0 1.0
C A:LYS74 4.8 27.0 1.0
C A:XPO603 4.9 41.2 1.0
CB A:ALA111 4.9 27.0 1.0
CA A:LYS74 5.0 28.5 1.0

Magnesium binding site 2 out of 2 in 4iok

Go back to Magnesium Binding Sites List in 4iok
Magnesium binding site 2 out of 2 in the N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of N10-Formyltetrahydrofolate Synthetase From Moorella Thermoacetica with Adp, Xpo within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg604

b:34.9
occ:1.00
O4 B:XPO603 1.8 46.2 1.0
O1B B:ADP602 2.0 27.2 1.0
O B:HOH782 2.0 20.4 1.0
OE1 B:GLU301 2.1 41.5 1.0
O B:HOH783 2.4 27.1 1.0
OG1 B:THR75 2.5 30.2 1.0
PB B:ADP602 3.2 27.6 1.0
CD B:GLU301 3.2 41.1 1.0
P B:XPO603 3.4 40.3 1.0
CB B:THR75 3.5 30.2 1.0
O3B B:ADP602 3.5 28.6 1.0
OE2 B:GLU301 3.6 44.5 1.0
NH2 B:ARG97 3.9 25.4 1.0
N B:THR75 4.0 33.7 1.0
O2B B:ADP602 4.0 29.1 1.0
O1 B:XPO603 4.0 43.4 1.0
O2A B:ADP602 4.2 28.4 1.0
O2 B:XPO603 4.2 39.4 1.0
CA B:THR75 4.2 31.1 1.0
NZ B:LYS74 4.3 31.7 1.0
O3 B:XPO603 4.3 42.0 1.0
O3A B:ADP602 4.4 28.6 1.0
CB B:LYS74 4.5 29.9 1.0
CG B:GLU301 4.5 39.0 1.0
CG2 B:THR75 4.6 29.5 1.0
PA B:ADP602 4.7 31.6 1.0
O1A B:ADP602 4.7 29.9 1.0
CB B:ALA111 4.8 27.3 1.0
NZ B:LYS108 4.8 29.9 1.0
O B:HOH768 4.8 31.4 1.0
CE B:LYS74 4.8 27.7 1.0
C B:XPO603 4.8 38.1 1.0
C B:LYS74 4.9 32.5 1.0

Reference:

B.Stec, B.Stec. N/A N/A.
ISSN: ISSN 0961-8368
PubMed: 23533144
DOI: 10.1002/PRO.2252
Page generated: Fri Aug 16 16:57:44 2024

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