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Magnesium in PDB 4j00: Crystal Structure of Fischerella Transcription Factor Hetr Complexed with 24MER Dna Target

Protein crystallography data

The structure of Crystal Structure of Fischerella Transcription Factor Hetr Complexed with 24MER Dna Target, PDB code: 4j00 was solved by Y.Kim, G.Joachimiak, P.Gornicki, A.Joachimiak, Mcsg, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.47 / 3.00
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 92.930, 92.930, 97.652, 90.00, 90.00, 120.00
R / Rfree (%) 16.8 / 20.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Fischerella Transcription Factor Hetr Complexed with 24MER Dna Target (pdb code 4j00). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Fischerella Transcription Factor Hetr Complexed with 24MER Dna Target, PDB code: 4j00:

Magnesium binding site 1 out of 1 in 4j00

Go back to Magnesium Binding Sites List in 4j00
Magnesium binding site 1 out of 1 in the Crystal Structure of Fischerella Transcription Factor Hetr Complexed with 24MER Dna Target


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Fischerella Transcription Factor Hetr Complexed with 24MER Dna Target within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:38.7
occ:1.00
OD1 B:ASP283 2.0 56.5 1.0
NE2 B:HIS281 2.0 53.9 1.0
CG B:ASP283 2.9 59.4 1.0
CE1 B:HIS281 3.0 59.0 1.0
CD2 B:HIS281 3.0 56.0 1.0
OD2 B:ASP283 3.1 59.4 1.0
ND1 B:HIS281 4.1 59.9 1.0
CG B:HIS281 4.1 59.7 1.0
CB B:ASP283 4.2 59.1 1.0
CA B:ASP283 4.9 58.3 1.0

Reference:

Y.Kim, Z.Ye, G.Joachimiak, P.Videau, J.Young, K.Hurd, S.M.Callahan, P.Gornicki, J.Zhao, R.Haselkorn, A.Joachimiak. Structures of Complexes Comprised of Fischerella Transcription Factor Hetr with Anabaena Dna Targets. Proc.Natl.Acad.Sci.Usa V. 110 E1716 2013.
ISSN: ISSN 0027-8424
PubMed: 23610410
DOI: 10.1073/PNAS.1305971110
Page generated: Fri Aug 16 17:06:57 2024

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