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Magnesium in PDB 4jlv: Crystal Structure of the Chimerical Protein CAPA1B1 in Complex with Adp-Mg

Protein crystallography data

The structure of Crystal Structure of the Chimerical Protein CAPA1B1 in Complex with Adp-Mg, PDB code: 4jlv was solved by J.Gruszczyk, V.Olivares-Illana, J.Nourikyan, A.Fleurie, E.Bechet, M.Aumont-Nicaise, V.Gueguen-Chaignon, S.Morera, C.Grangeasse, S.Nessler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.14 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.030, 64.630, 88.280, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Chimerical Protein CAPA1B1 in Complex with Adp-Mg (pdb code 4jlv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Chimerical Protein CAPA1B1 in Complex with Adp-Mg, PDB code: 4jlv:

Magnesium binding site 1 out of 1 in 4jlv

Go back to Magnesium Binding Sites List in 4jlv
Magnesium binding site 1 out of 1 in the Crystal Structure of the Chimerical Protein CAPA1B1 in Complex with Adp-Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Chimerical Protein CAPA1B1 in Complex with Adp-Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1302

b:59.9
occ:1.00
O2B A:ADP1301 2.4 55.1 1.0
O A:HOH1410 2.6 55.2 1.0
OG A:SER1056 2.6 48.0 1.0
O1B A:ADP1301 3.2 66.0 1.0
PB A:ADP1301 3.3 63.7 1.0
CG2 A:THR1084 3.5 52.5 1.0
CB A:SER1056 3.6 52.8 1.0
O1A A:ADP1301 3.7 66.4 1.0
O A:HOH1422 3.8 49.4 1.0
O3A A:ADP1301 4.0 66.1 1.0
O A:HOH1417 4.0 54.4 1.0
CB A:THR1084 4.2 52.6 1.0
PA A:ADP1301 4.3 71.0 1.0
N A:SER1056 4.5 48.8 1.0
OD2 A:ASP1157 4.6 46.0 1.0
OD2 A:ASP1079 4.6 52.8 1.0
O A:LYS1082 4.6 50.6 1.0
O3B A:ADP1301 4.6 59.5 1.0
CA A:SER1056 4.7 46.8 1.0
OG1 A:THR1084 4.8 62.9 1.0
CE A:LYS1055 4.8 50.1 1.0
O2A A:ADP1301 4.9 65.2 1.0

Reference:

J.Gruszczyk, V.Olivares-Illana, J.Nourikyan, A.Fleurie, E.Bechet, V.Gueguen-Chaignon, C.Freton, M.Aumont-Nicaise, S.Morera, C.Grangeasse, S.Nessler. Comparative Analysis of the Tyr-Kinases CAPB1 and CAPB2 Fused to Their Cognate Modulators CAPA1 and CAPA2 From Staphylococcus Aureus Plos One V. 8 75958 2013.
ISSN: ESSN 1932-6203
PubMed: 24146800
DOI: 10.1371/JOURNAL.PONE.0075958
Page generated: Sat Aug 17 03:13:16 2024

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