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Magnesium in PDB 4m7x: Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog

Enzymatic activity of Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog

All present enzymatic activity of Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog:
2.7.1.33;

Protein crystallography data

The structure of Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog, PDB code: 4m7x was solved by K.Mottaghi, B.Hong, W.Tempel, H.Park, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.00 / 1.42
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 56.920, 136.530, 73.620, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 19.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog (pdb code 4m7x). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog, PDB code: 4m7x:

Magnesium binding site 1 out of 1 in 4m7x

Go back to Magnesium Binding Sites List in 4m7x
Magnesium binding site 1 out of 1 in the Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:19.7
occ:1.00
OAF A:27Q315 1.9 27.4 1.0
O A:HOH402 2.0 19.6 1.0
O2B A:ADP301 2.1 19.3 1.0
O A:HOH401 2.1 23.7 1.0
O A:HOH403 2.1 21.5 1.0
O A:HOH404 2.2 20.7 1.0
PAX A:27Q315 3.4 30.6 1.0
PB A:ADP301 3.4 20.4 1.0
OAH A:27Q315 3.7 28.4 1.0
OE1 A:GLU70 3.9 28.2 1.0
O1B A:ADP301 3.9 22.6 1.0
O3A A:ADP301 3.9 18.5 1.0
NZ A:LYS13 4.1 19.2 1.0
O A:HOH422 4.1 21.5 1.0
OD2 A:ASP6 4.2 21.3 1.0
O A:HOH490 4.2 26.7 1.0
O A:HOH429 4.3 22.3 1.0
O2A A:ADP301 4.3 18.8 1.0
OAS A:27Q315 4.3 24.6 1.0
OD1 A:ASP6 4.3 21.2 1.0
O A:HOH411 4.3 21.8 1.0
OAI A:27Q315 4.4 21.7 1.0
ND2 A:ASN96 4.5 20.8 1.0
O3B A:ADP301 4.6 20.2 1.0
PA A:ADP301 4.6 18.2 1.0
CG A:ASP6 4.6 20.9 1.0
CA A:GLY8 4.6 19.1 1.0
OD1 A:ASN96 4.7 19.5 1.0
O A:HOH440 4.8 27.3 1.0
CD A:GLU70 4.9 29.8 1.0
CE A:LYS13 4.9 19.3 1.0
CG A:ASN96 5.0 19.6 1.0

Reference:

K.Mottaghi, B.Hong, W.Tempel, H.Park. Staphylococcus Aureus Type II Pantothenate Kinase in Complex with A Pantothenate Analog To Be Published.
Page generated: Mon Aug 19 20:18:49 2024

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