Magnesium in PDB 4mks: Crystal Structure of Enolase From Lactobacillus Gasseri

All present enzymatic activity of Crystal Structure of Enolase From Lactobacillus Gasseri:
4.2.1.11;

The structure of Crystal Structure of Enolase From Lactobacillus Gasseri, PDB code: 4mks was solved by K.Raghunathan, P.T.Harris, R.R.Spurbeck, C.G.Arvidson, D.N.Arvidson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	54.45 / 2.08
Space group	I 4
Cell size a, b, c (Å), α, β, γ (°)	145.240, 145.240, 99.860, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 23.4

The structure of Crystal Structure of Enolase From Lactobacillus Gasseri also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of Enolase From Lactobacillus Gasseri (pdb code 4mks). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Enolase From Lactobacillus Gasseri, PDB code: 4mks:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Enolase From Lactobacillus Gasseri


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Enolase From Lactobacillus Gasseri within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:30.6 occ:1.00 OE2 A:GLU287 2.1 20.3 1.0 O A:HOH823 2.1 20.4 1.0 OD2 A:ASP314 2.2 20.5 1.0 OD2 A:ASP242 2.3 24.5 1.0 CG A:ASP242 3.2 28.6 1.0 CG A:ASP314 3.2 24.2 1.0 CD A:GLU287 3.3 23.7 1.0 OD1 A:ASP242 3.5 27.2 1.0 NZ A:LYS390 3.7 21.1 1.0 CB A:ASP314 3.7 18.2 1.0 CD2 A:LEU337 4.0 19.7 1.0 OE1 A:GLU287 4.0 20.9 1.0 NZ A:LYS339 4.1 19.0 1.0 CG A:GLU287 4.2 19.8 1.0 OD1 A:ASP314 4.2 20.7 1.0 OD2 A:ASP288 4.3 25.0 1.0 CB A:ASP242 4.4 20.0 1.0 OE2 A:GLU164 4.5 26.6 1.0 NE2 A:GLN163 4.7 35.2 1.0 CD A:GLU164 5.0 26.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Enolase From Lactobacillus Gasseri


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Enolase From Lactobacillus Gasseri within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:37.3 occ:1.00 OD2 B:ASP242 2.2 26.1 1.0 OD2 B:ASP314 2.2 22.9 1.0 OE2 B:GLU287 2.3 25.7 1.0 CG B:ASP242 3.1 35.0 1.0 CG B:ASP314 3.3 26.6 1.0 CD B:GLU287 3.4 25.2 1.0 OD1 B:ASP242 3.5 36.0 1.0 CB B:ASP314 3.7 22.6 1.0 NZ B:LYS390 3.8 24.4 1.0 O B:HOH703 4.0 46.3 1.0 OE1 B:GLU287 4.2 31.8 1.0 CD2 B:LEU337 4.3 19.8 1.0 NZ B:LYS339 4.3 25.4 1.0 CG B:GLU287 4.3 23.7 1.0 OD1 B:ASP314 4.3 26.3 1.0 OD2 B:ASP288 4.3 31.0 1.0 CB B:ASP242 4.4 26.5 1.0 OE2 B:GLU164 4.4 35.9 1.0 NE2 B:GLN163 4.5 43.8 1.0 CB B:ALA244 4.9 37.6 1.0 CD B:GLU164 5.0 30.7 1.0

K.Raghunathan, P.T.Harris, R.R.Spurbeck, C.G.Arvidson, D.N.Arvidson. Crystal Structure of An Efficacious Gonococcal Adherence Inhibitor: An Enolase From Lactobacillus Gasseri. Febs Lett. V. 588 2212 2014.
ISSN: ISSN 0014-5793
PubMed: 24859038
DOI: 10.1016/J.FEBSLET.2014.05.020