Magnesium in PDB 4mn0: Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State

The structure of Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State, PDB code: 4mn0 was solved by Z.J.Liu, G.A.Stepanyuk, E.S.Vysotski, J.Lee, J.P.Rose, B.C.Wang, Southeastcollaboratory For Structural Genomics (Secsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.78 / 1.90
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	101.770, 33.899, 77.406, 90.00, 126.74, 90.00
R / Rfree (%)	19.3 / 25.6

The structure of Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State also contains other interesting chemical elements:

Calcium

(Ca)

3 atoms

The binding sites of Magnesium atom in the Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State (pdb code 4mn0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State, PDB code: 4mn0:

Magnesium binding site 1 out of 1 in the Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the CA2+-Loaded Apoprotein Conformation State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg304 b:18.0 occ:1.00 O A:HOH428 2.1 17.5 1.0 O A:HOH437 2.1 16.4 1.0 O A:HOH419 2.1 21.1 1.0 O A:HOH402 2.2 13.5 1.0 O A:HOH422 2.2 19.1 1.0 O A:HOH412 2.2 18.1 1.0 OE2 A:GLU57 4.0 15.9 1.0 CG A:GLU57 4.3 13.5 1.0 OD2 A:ASP56 4.3 33.2 1.0 OD1 A:ASP56 4.3 21.7 1.0 OD2 A:ASP48 4.3 20.6 1.0 OE1 A:GLU54 4.3 21.3 1.0 CD A:GLU57 4.5 15.8 1.0 CG A:ASP48 4.5 20.9 1.0 O A:HOH549 4.6 43.0 1.0 CG A:ASP56 4.7 25.5 1.0 O A:HOH401 4.7 25.1 1.0 CB A:ASP48 4.8 19.7 1.0 OD1 A:ASP48 5.0 20.1 1.0 O A:HOH563 5.0 37.8 1.0

G.A.Stepanyuk, Z.J.Liu, L.P.Burakova, J.Lee, J.Rose, E.S.Vysotski, B.C.Wang. Spatial Structure of the Novel Light-Sensitive Photoprotein Berovin From the Ctenophore Beroe Abyssicola in the Ca(2+)-Loaded Apoprotein Conformation State. Biochim.Biophys.Acta V.1834 2139 2013.
ISSN: ISSN 0006-3002
PubMed: 23891746
DOI: 10.1016/J.BBAPAP.2013.07.006