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Magnesium in PDB 4mo5: Crystal Structure of Anmk Bound to Amppcp and Anhmurnac

Enzymatic activity of Crystal Structure of Anmk Bound to Amppcp and Anhmurnac

All present enzymatic activity of Crystal Structure of Anmk Bound to Amppcp and Anhmurnac:
2.7.1.170;

Protein crystallography data

The structure of Crystal Structure of Anmk Bound to Amppcp and Anhmurnac, PDB code: 4mo5 was solved by J.P.Bacik, B.L.Mark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.81 / 1.75
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 59.299, 70.407, 90.968, 106.43, 104.43, 98.25
R / Rfree (%) 17.4 / 21

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Anmk Bound to Amppcp and Anhmurnac (pdb code 4mo5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Anmk Bound to Amppcp and Anhmurnac, PDB code: 4mo5:

Magnesium binding site 1 out of 1 in 4mo5

Go back to Magnesium Binding Sites List in 4mo5
Magnesium binding site 1 out of 1 in the Crystal Structure of Anmk Bound to Amppcp and Anhmurnac


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Anmk Bound to Amppcp and Anhmurnac within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg403

b:12.2
occ:0.23
O1B D:ACP402 1.9 41.4 1.0
O D:HOH564 2.0 27.1 1.0
O D:HOH853 2.1 35.7 1.0
O D:HOH701 2.1 33.8 1.0
O D:HOH661 2.1 34.2 1.0
PB D:ACP402 3.3 40.3 1.0
O2A D:ACP402 3.6 23.8 1.0
O3G D:ACP402 3.7 62.8 1.0
OE1 D:GLU326 3.7 46.7 1.0
O2B D:ACP402 3.8 40.0 1.0
O3A D:ACP402 4.2 42.5 1.0
CD D:GLU326 4.2 43.5 1.0
OE2 D:GLU326 4.4 44.6 1.0
O D:HOH808 4.4 40.0 1.0
OD1 D:ASN162 4.4 21.5 1.0
O D:HOH557 4.4 26.1 1.0
C3B D:ACP402 4.5 52.1 1.0
PA D:ACP402 4.5 31.0 1.0
ND2 D:ASN162 4.7 24.7 1.0
PG D:ACP402 4.7 63.1 1.0
O D:HOH530 4.8 24.1 1.0
O D:HOH733 4.9 43.5 1.0
CB D:GLU326 4.9 27.3 1.0
CG D:ASN162 5.0 20.8 1.0

Reference:

J.P.Bacik, M.Tavassoli, T.R.Patel, S.A.Mckenna, D.J.Vocadlo, M.Khajehpour, B.L.Mark. Conformational Itinerary of Pseudomonas Aeruginosa 1,6-Anhydro-N-Acetylmuramic Acid Kinase During Its Catalytic Cycle. J.Biol.Chem. V. 289 4504 2014.
ISSN: ISSN 0021-9258
PubMed: 24362022
DOI: 10.1074/JBC.M113.521633
Page generated: Mon Aug 19 23:15:47 2024

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