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Magnesium in PDB 4mo7: Crystal Structure of Superantigen Pfit

Protein crystallography data

The structure of Crystal Structure of Superantigen Pfit, PDB code: 4mo7 was solved by L.H.Liu, H.Chen, H.M.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.19 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 37.226, 93.661, 53.557, 90.00, 109.82, 90.00
R / Rfree (%) 18.9 / 23.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Superantigen Pfit (pdb code 4mo7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Superantigen Pfit, PDB code: 4mo7:

Magnesium binding site 1 out of 1 in 4mo7

Go back to Magnesium Binding Sites List in 4mo7
Magnesium binding site 1 out of 1 in the Crystal Structure of Superantigen Pfit


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Superantigen Pfit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:9.4
occ:0.50
NE2 A:HIS26 2.2 23.4 1.0
O A:HOH387 2.6 39.7 1.0
O A:HOH411 2.9 45.7 1.0
CD2 A:HIS26 3.2 18.7 1.0
CE1 A:HIS26 3.2 20.0 1.0
ND1 A:HIS26 4.3 18.5 1.0
CG A:HIS26 4.3 16.8 1.0
O A:GLN22 4.6 20.4 1.0
OE1 A:GLU109 4.7 36.8 1.0
NE2 A:GLN22 4.9 38.2 1.0

Reference:

L.Liu, H.Chen, M.B.Brecher, Z.Li, B.Wei, B.Nandi, J.Zhang, H.Ling, G.Winslow, J.Braun, H.Li. Pfit Is A Structurally Novel Crohn'S Disease-Associated Superantigen. Plos Pathog. V. 9 03837 2013.
ISSN: ISSN 1553-7366
PubMed: 24385909
DOI: 10.1371/JOURNAL.PPAT.1003837
Page generated: Mon Aug 19 23:17:06 2024

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