Magnesium in PDB 4n15: Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate

The structure of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate, PDB code: 4n15 was solved by M.W.Vetting, R.Toro, R.Bhosle, N.F.Al Obaidi, S.Zhao, M.Stead, J.D.Attonito, A.Scott Glenn, S.Chowdhury, B.Evans, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, M.P.Jacobson, J.A.Gerlt, S.C.Almo, Enzyme Functioninitiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.07 / 1.65
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	96.190, 101.781, 55.522, 90.00, 90.00, 90.00
R / Rfree (%)	15.8 / 19.6

The binding sites of Magnesium atom in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate (pdb code 4n15). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate, PDB code: 4n15:

Magnesium binding site 1 out of 1 in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:19.0 occ:1.00 O A:HOH716 2.0 17.1 1.0 OD1 A:ASP322 2.1 16.5 1.0 O A:HOH542 2.1 18.8 1.0 O A:HOH523 2.1 13.8 1.0 O A:HOH593 2.2 22.6 1.0 CG A:ASP322 3.0 16.1 1.0 OD2 A:ASP322 3.3 16.4 1.0 O A:HOH746 3.9 35.9 1.0 O A:HOH594 4.1 25.9 1.0 HA A:ASP322 4.3 18.3 1.0 CB A:ASP322 4.4 15.6 1.0 O A:HOH613 4.4 27.2 1.0 HG12 A:VAL321 4.4 28.0 1.0 O A:LYS318 4.5 20.0 1.0 OE2 A:GLU325 4.6 19.7 1.0 OE2 A:GLU312 4.7 30.8 1.0 HB A:VAL321 4.7 24.5 1.0 H A:ASP322 4.7 18.4 1.0 HB3 A:LYS318 4.7 30.1 1.0 CA A:ASP322 4.7 15.2 1.0 HG11 A:VAL321 4.8 28.0 1.0 N A:ASP322 4.8 15.3 1.0 HB3 A:ASP322 4.9 18.7 1.0 HG2 A:LYS318 4.9 39.8 1.0 HB2 A:ASP322 5.0 18.7 1.0

M.W.Vetting, R.Toro, R.Bhosle, N.F.Al Obaidi, S.Zhao, M.Stead, J.D.Attonito, A.Scott Glenn, S.Chowdhury, B.Evans, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, M.P.Jacobson, J.A.Gerlt, S.C.Almo. Crystal Structure of A Trap Periplasmic Solute Binding Protein From Burkholderia Ambifaria (BAM_6123), Target Efi-510059, with Bound Beta-D-Glucuronate To Be Published.