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Magnesium in PDB 4n36: Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac

Protein crystallography data

The structure of Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac, PDB code: 4n36 was solved by H.Feinberg, T.J.W.Rowntree, S.L.W.Tan, K.Drickamer, W.I.Weis, M.E.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.13 / 1.85
Space group P 42
Cell size a, b, c (Å), α, β, γ (°) 79.550, 79.550, 89.880, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 21.4

Other elements in 4n36:

The structure of Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac (pdb code 4n36). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac, PDB code: 4n36:

Magnesium binding site 1 out of 1 in 4n36

Go back to Magnesium Binding Sites List in 4n36
Magnesium binding site 1 out of 1 in the Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Langerin Crd I313 D288 Complexed with Me-Glcnac within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg403

b:27.9
occ:0.50
O D:HOH502 2.1 30.1 1.0
O D:HOH501 2.1 29.3 1.0
OD1 D:ASN291 2.1 28.2 1.0
CG D:ASN291 3.1 34.7 1.0
ND2 D:ASN291 3.6 31.4 1.0
O D:HOH600 4.1 40.3 1.0
OD2 D:ASP288 4.2 27.3 1.0
O D:HOH613 4.4 40.3 1.0
CB D:ASN291 4.5 30.1 1.0
O D:ASP288 4.5 27.4 1.0
CA D:ASN291 4.8 27.0 1.0
CG D:ASP288 4.8 30.1 1.0
CB D:ASP288 4.8 26.5 1.0

Reference:

H.Feinberg, T.J.Rowntree, S.L.Tan, K.Drickamer, W.I.Weis, M.E.Taylor. Common Polymorphisms in Human Langerin Change Specificity For Glycan Ligands. J.Biol.Chem. V. 288 36762 2013.
ISSN: ISSN 0021-9258
PubMed: 24217250
DOI: 10.1074/JBC.M113.528000
Page generated: Mon Aug 19 23:25:07 2024

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