Magnesium in PDB 4n38: Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3

The structure of Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3, PDB code: 4n38 was solved by H.Feinberg, T.J.W.Rowntree, S.L.W.Tan, K.Drickamer, W.I.Weis, M.E.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.56 / 2.00
Space group	P 42
Cell size a, b, c (Å), α, β, γ (°)	79.030, 79.030, 91.390, 90.00, 90.00, 90.00
R / Rfree (%)	18.1 / 23.3

The structure of Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3 also contains other interesting chemical elements:

Calcium

(Ca)

4 atoms

The binding sites of Magnesium atom in the Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3 (pdb code 4n38). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3, PDB code: 4n38:

Magnesium binding site 1 out of 1 in the Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Langerin Crd I313 D288 Complexed with Glcnac-BETA1-3GAL- BETA1-4GLCNAC-Beta-CH2CH2N3 within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg404 b:38.7 occ:0.50 O D:HOH502 2.1 39.1 1.0 O D:HOH501 2.1 36.0 1.0 OD1 D:ASN291 2.1 32.5 1.0 CG D:ASN291 3.2 42.3 1.0 ND2 D:ASN291 3.6 38.2 1.0 OD2 D:ASP288 4.2 37.3 1.0 CB D:ASN291 4.5 35.9 1.0 O D:ASP288 4.6 41.2 1.0 CB D:ASP288 4.8 39.0 1.0 CG D:ASP288 4.8 34.5 1.0 CA D:ASN291 4.9 35.8 1.0

H.Feinberg, T.J.Rowntree, S.L.Tan, K.Drickamer, W.I.Weis, M.E.Taylor. Common Polymorphisms in Human Langerin Change Specificity For Glycan Ligands. J.Biol.Chem. V. 288 36762 2013.
ISSN: ISSN 0021-9258
PubMed: 24217250
DOI: 10.1074/JBC.M113.528000