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Magnesium in PDB 4nob: Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor [Psi-Nysgrc-006220]

Protein crystallography data

The structure of Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor [Psi-Nysgrc-006220], PDB code: 4nob was solved by P.R.Kumar, R.Banu, R.Bhosle, D.A.Calarese, A.Celikgil, S.Chamala, M.K.Chan, S.Chowdhury, A.Fiser, S.J.Garforth, A.S.Glenn, B.Hillerich, K.Khafizov, J.Attonito, J.D.Love, H.Patel, R.Patel, R.D.Seidel, B.Smith, M.Stead, A.Casadevall, S.C.Almo, New York Structural Genomics Researchconsortium (Nysgrc), Atoms-To-Animals: The Immune Function Network(Ifn), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.37 / 1.51
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.275, 46.803, 62.062, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 18.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor [Psi-Nysgrc-006220] (pdb code 4nob). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor [Psi-Nysgrc-006220], PDB code: 4nob:

Magnesium binding site 1 out of 1 in 4nob

Go back to Magnesium Binding Sites List in 4nob
Magnesium binding site 1 out of 1 in the Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor [Psi-Nysgrc-006220]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor [Psi-Nysgrc-006220] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:18.4
occ:0.75
O A:HOH350 2.0 33.3 1.0
O A:HOH362 2.0 26.8 1.0
O A:HOH370 2.1 27.1 1.0
OE2 A:GLU126 2.1 26.2 1.0
O A:HOH363 2.1 29.7 1.0
CD A:GLU126 3.1 27.5 1.0
OE1 A:GLU126 3.4 30.3 1.0
O A:HOH332 3.8 22.8 1.0
O A:VAL127 4.1 13.8 1.0
OG A:SER128 4.4 20.6 1.0
CG A:GLU126 4.5 21.9 1.0
CA A:SER128 4.6 14.2 1.0
NE2 A:GLN102 4.7 10.9 1.0
OG1 A:THR105 4.7 11.9 1.0
C A:VAL127 4.8 11.8 1.0
CB A:SER128 4.9 16.5 1.0

Reference:

P.R.Kumar, A.Casadevall, S.C.Almo. Crystal Structure of the 1ST Ig Domain From Mouse Polymeric Immunoglobulin Receptor To Be Published.
Page generated: Mon Dec 14 19:15:18 2020

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