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Magnesium in PDB 4ol0: Crystal Structure of Transportin-SR2, A Karyopherin Involved in Human Disease, in Complex with Ran

Protein crystallography data

The structure of Crystal Structure of Transportin-SR2, A Karyopherin Involved in Human Disease, in Complex with Ran, PDB code: 4ol0 was solved by V.G.Tsirkone, S.V.Strelkov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.18 / 2.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 74.202, 109.970, 148.462, 90.00, 90.00, 90.00
R / Rfree (%) 22.2 / 27.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Transportin-SR2, A Karyopherin Involved in Human Disease, in Complex with Ran (pdb code 4ol0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Transportin-SR2, A Karyopherin Involved in Human Disease, in Complex with Ran, PDB code: 4ol0:

Magnesium binding site 1 out of 1 in 4ol0

Go back to Magnesium Binding Sites List in 4ol0
Magnesium binding site 1 out of 1 in the Crystal Structure of Transportin-SR2, A Karyopherin Involved in Human Disease, in Complex with Ran


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Transportin-SR2, A Karyopherin Involved in Human Disease, in Complex with Ran within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:54.2
occ:1.00
OG1 A:THR24 2.0 36.6 1.0
OG1 A:THR42 2.1 38.3 1.0
O2B A:GTP302 2.1 39.3 1.0
O1G A:GTP302 2.2 31.8 1.0
CB A:THR42 3.2 38.4 1.0
CB A:THR24 3.3 39.1 1.0
OD2 A:ASP65 3.4 66.0 1.0
PG A:GTP302 3.4 35.9 1.0
PB A:GTP302 3.4 43.5 1.0
O3B A:GTP302 3.8 42.6 1.0
N A:THR24 3.8 46.7 1.0
OD1 A:ASP65 3.8 64.1 1.0
O2G A:GTP302 3.9 44.5 1.0
CG A:ASP65 4.0 63.5 1.0
CA A:THR24 4.1 42.6 1.0
N A:THR42 4.1 42.3 1.0
CG2 A:THR42 4.1 36.0 1.0
O A:THR66 4.2 53.6 1.0
CA A:THR42 4.2 45.8 1.0
O1B A:GTP302 4.3 44.6 1.0
O2A A:GTP302 4.3 54.1 1.0
CG2 A:THR24 4.4 37.9 1.0
CB A:LYS23 4.4 49.1 1.0
CE A:LYS23 4.5 39.8 1.0
O3A A:GTP302 4.5 48.0 1.0
O3G A:GTP302 4.6 44.7 1.0
C A:LYS23 4.8 49.1 1.0
PA A:GTP302 4.8 48.4 1.0
NZ A:LYS23 4.8 34.3 1.0
O1A A:GTP302 5.0 39.9 1.0

Reference:

V.G.Tsirkone, K.G.Beutels, J.Demeulemeester, Z.Debyser, F.Christ, S.V.Strelkov. Structure of Transportin SR2, A Karyopherin Involved in Human Disease, in Complex with Ran. Acta Crystallogr.,Sect.F V. 70 723 2014.
ISSN: ISSN 1744-3091
PubMed: 24915079
DOI: 10.1107/S2053230X14009492
Page generated: Tue Aug 20 00:55:15 2024

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