Atomistry » Magnesium » PDB 4osl-4p7a » 4p1o
Atomistry »
  Magnesium »
    PDB 4osl-4p7a »
      4p1o »

Magnesium in PDB 4p1o: Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg

Protein crystallography data

The structure of Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg, PDB code: 4p1o was solved by M.A.Corral-Rodriguez, M.Stuiver, G.Abascal-Palacios, T.Diercks, I.Oyenarte, J.Ereno-Orbea, J.A.Encinar, V.Spiwok, H.Terashima, A.Accardi, D.Muller, L.A.Martinez-Cruz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.08 / 3.06
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 104.633, 104.633, 99.861, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 25.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg (pdb code 4p1o). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg, PDB code: 4p1o:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4p1o

Go back to Magnesium Binding Sites List in 4p1o
Magnesium binding site 1 out of 2 in the Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:87.0
occ:1.00
O2B A:ATP602 2.0 43.1 1.0
O1A A:ATP602 2.0 45.0 1.0
O1G A:ATP602 2.0 43.0 1.0
PG A:ATP602 3.0 42.5 0.2
PB A:ATP602 3.1 44.1 0.5
O2G A:ATP602 3.2 41.9 0.8
PA A:ATP602 3.3 46.3 0.6
O3B A:ATP602 3.3 43.5 1.0
O3A A:ATP602 3.5 46.0 1.0
O3G B:ATP602 4.0 51.6 1.0
O2A A:ATP602 4.3 47.0 1.0
O5' A:ATP602 4.3 48.5 0.8
O3G A:ATP602 4.4 42.3 0.9
C5' A:ATP602 4.4 48.6 1.0
O1B A:ATP602 4.5 44.9 1.0
CG A:GLU570 4.6 61.6 1.0
PG B:ATP602 4.8 51.6 0.3
O2G B:ATP602 5.0 51.0 0.6

Magnesium binding site 2 out of 2 in 4p1o

Go back to Magnesium Binding Sites List in 4p1o
Magnesium binding site 2 out of 2 in the Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Bateman Domain of Murine Magnesium Transporter CNNM2 Bound to Atp-Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:93.3
occ:1.00
O1G B:ATP602 2.0 52.1 1.0
O1A B:ATP602 2.0 54.3 1.0
O2B B:ATP602 2.0 52.3 1.0
PB B:ATP602 3.2 53.1 0.6
PG B:ATP602 3.3 51.6 0.3
PA B:ATP602 3.4 55.9 0.7
O3B B:ATP602 3.6 52.7 1.0
O3G A:ATP602 3.7 42.3 0.9
O3A B:ATP602 3.7 55.3 0.8
O2G B:ATP602 3.8 51.0 0.6
C5' B:ATP602 4.3 58.0 1.0
O5' B:ATP602 4.3 58.3 0.9
O2A B:ATP602 4.4 56.6 1.0
O3G B:ATP602 4.5 51.6 1.0
O1B B:ATP602 4.6 53.6 1.0
CG B:GLU570 4.6 75.4 1.0
PG A:ATP602 4.7 42.5 0.2

Reference:

M.A.Corral-Rodriguez, M.Stuiver, G.Abascal-Palacios, T.Diercks, I.Oyenarte, J.Ereno-Orbea, J.A.Encinar, V.Spiwok, H.Terashima, A.Accardi, D.Muller, L.A.Martinez-Cruz. Structural and Ligand Binding Properties of the Bateman Domain of Human Magnesium Transporters CNNM2 and CNNM4 To Be Published.
Page generated: Tue Aug 20 01:05:01 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy