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Magnesium in PDB 4p3c: MT1-Mmp:Fab Complex (Form I)

Enzymatic activity of MT1-Mmp:Fab Complex (Form I)

All present enzymatic activity of MT1-Mmp:Fab Complex (Form I):
3.4.24.80;

Protein crystallography data

The structure of MT1-Mmp:Fab Complex (Form I), PDB code: 4p3c was solved by H.Rozenberg, Y.Udi, I.Sagi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.28 / 1.94
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.314, 80.975, 95.568, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 20

Other elements in 4p3c:

The structure of MT1-Mmp:Fab Complex (Form I) also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the MT1-Mmp:Fab Complex (Form I) (pdb code 4p3c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the MT1-Mmp:Fab Complex (Form I), PDB code: 4p3c:

Magnesium binding site 1 out of 1 in 4p3c

Go back to Magnesium Binding Sites List in 4p3c
Magnesium binding site 1 out of 1 in the MT1-Mmp:Fab Complex (Form I)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of MT1-Mmp:Fab Complex (Form I) within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:24.5
occ:0.59
OD1 L:ASP17 2.0 13.3 1.0
O L:HOH485 2.2 34.0 1.0
O L:HOH438 2.2 25.5 1.0
O L:HOH455 2.5 36.4 1.0
CG L:ASP17 3.0 14.4 1.0
OD2 L:ASP17 3.4 14.3 1.0
CB L:ASP17 4.4 12.3 1.0
O L:GLY16 4.5 17.7 1.0
C L:GLY16 4.5 15.6 1.0
CA L:ASP17 4.6 11.0 1.0
N L:ASP17 4.6 10.6 1.0
O L:LEU15 4.7 12.3 1.0

Reference:

Y.Udi, M.Grossman, I.Solomonov, O.Dym, H.Rozenberg, V.Moreno, P.Cuniasse, V.Dive, A.G.Arroyo, I.Sagi. Inhibition Mechanism of Membrane Metalloprotease By An Exosite-Swiveling Conformational Antibody. Structure 2014.
ISSN: ISSN 0969-2126
PubMed: 25482542
DOI: 10.1016/J.STR.2014.10.012
Page generated: Tue Aug 20 01:05:56 2024

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