Magnesium in PDB 4pdn: Crystal Structure of E. Coli Yfcm

The structure of Crystal Structure of E. Coli Yfcm, PDB code: 4pdn was solved by K.Kobayashi, R.Ishii, R.Ishitani, O.Nureki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.92 / 1.45
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	124.360, 36.968, 37.636, 90.00, 101.22, 90.00
R / Rfree (%)	14.8 / 17.5

The binding sites of Magnesium atom in the Crystal Structure of E. Coli Yfcm (pdb code 4pdn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of E. Coli Yfcm, PDB code: 4pdn:

Magnesium binding site 1 out of 1 in the Crystal Structure of E. Coli Yfcm


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of E. Coli Yfcm within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:24.4 occ:1.00 NE2 A:HIS63 2.0 32.1 1.0 NE2 A:HIS59 2.0 28.7 1.0 O A:HOH356 2.1 40.7 1.0 OE1 A:GLU98 2.4 40.5 1.0 OE2 A:GLU98 2.4 44.3 1.0 CD A:GLU98 2.7 41.2 1.0 CE1 A:HIS59 2.7 26.2 1.0 CE1 A:HIS63 2.9 32.5 1.0 CD2 A:HIS63 3.0 33.6 1.0 CD2 A:HIS59 3.1 26.7 1.0 ND1 A:HIS59 3.9 23.7 1.0 ND1 A:HIS63 4.0 31.9 1.0 CG A:HIS63 4.1 27.6 1.0 CG A:HIS59 4.1 21.9 1.0 CG A:GLU98 4.1 39.2 1.0 O A:HOH346 4.3 41.9 1.0 CB A:PRO101 4.9 24.7 1.0

K.Kobayashi, R.Ishii, R.Ishitani, O.Nureki. Crystal Structure of E. Coli Yfcm To Be Published.