Magnesium in PDB 4qgr: Crystal Structure of A Degt Dnrj ERYC1 Strs Aminotransferase From Brucella Abortus

Protein crystallography data

The structure of Crystal Structure of A Degt Dnrj ERYC1 Strs Aminotransferase From Brucella Abortus, PDB code: 4qgr was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.690, 92.060, 86.410, 90.00, 96.82, 90.00
R / Rfree (%) 15.6 / 18.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Degt Dnrj ERYC1 Strs Aminotransferase From Brucella Abortus (pdb code 4qgr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Degt Dnrj ERYC1 Strs Aminotransferase From Brucella Abortus, PDB code: 4qgr:

Magnesium binding site 1 out of 1 in 4qgr

Go back to Magnesium Binding Sites List in 4qgr
Magnesium binding site 1 out of 1 in the Crystal Structure of A Degt Dnrj ERYC1 Strs Aminotransferase From Brucella Abortus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Degt Dnrj ERYC1 Strs Aminotransferase From Brucella Abortus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:12.8
occ:1.00
O A:HOH512 2.1 9.7 1.0
O B:HOH514 2.1 12.8 1.0
O A:HOH514 2.1 11.0 1.0
O A:HOH529 2.1 12.5 1.0
O B:HOH508 2.2 13.8 1.0
O B:HOH509 2.2 11.2 1.0
O A:HOH510 3.9 14.4 1.0
OD2 A:ASP238 4.0 12.0 1.0
OD2 B:ASP238 4.0 10.7 1.0
O B:HOH505 4.0 11.7 1.0
O A:ASP198 4.1 9.9 1.0
O A:HOH515 4.2 10.1 1.0
OD1 B:ASP238 4.2 10.3 1.0
O B:ASP198 4.2 13.3 1.0
O B:HOH513 4.2 12.5 1.0
OD1 A:ASP238 4.2 11.3 1.0
CG A:ASP238 4.4 11.8 1.0
CG B:ASP238 4.4 10.8 1.0
O A:ALA56 4.6 11.5 1.0
CB A:ASP198 4.7 10.5 1.0
O B:ALA56 4.8 12.1 1.0
CB B:ASP198 4.8 13.4 1.0
O B:ARG236 4.8 12.2 1.0
O A:ARG236 4.9 11.2 1.0
CB A:ALA56 4.9 12.8 1.0
C A:ASP198 4.9 10.3 1.0
CB B:ALA56 4.9 11.3 1.0
C B:ASP198 5.0 13.2 1.0

Reference:

T.E.Edwards, J.W.Fairman, J.J.Letesson, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of A Degt Dnrj ERYC1 Strs Family Protein From Bartonella Abortus To Be Published.
Page generated: Mon Dec 14 19:22:55 2020

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