Magnesium in PDB 4qox: Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500

Enzymatic activity of Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500

All present enzymatic activity of Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500, PDB code: 4qox was solved by A.K.Wernimont, J.R.Walker, A.Hutchinson, A.Seitova, H.He, P.Loppnau, M.Neculai, M.Amani, Y.H.Lin, M.Ravichandran, C.H.Arrowsmith, A.M.Edwards, C.Bountra, R.Hui, D.V.Lovato, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.56 / 2.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 70.289, 75.967, 92.688, 90.00, 90.00, 90.00
R / Rfree (%) 20.3 / 26.6

Other elements in 4qox:

The structure of Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500 also contains other interesting chemical elements:

Bromine (Br) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500 (pdb code 4qox). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500, PDB code: 4qox:

Magnesium binding site 1 out of 1 in 4qox

Go back to Magnesium Binding Sites List in 4qox
Magnesium binding site 1 out of 1 in the Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:67.6
occ:1.00
 OD1 A:ASP389 2.5 54.5 1.0
OD1 A:ASN391 2.5 84.7 1.0
O A:GLN395 2.7 58.4 1.0
O A:HOH702 2.8 45.0 1.0
OD1 A:ASP393 2.9 63.4 1.0
CG A:ASN391 3.5 72.0 1.0
CG A:ASP389 3.6 49.9 1.0
ND2 A:ASN391 3.8 74.9 1.0
CA A:ASP389 3.9 53.6 1.0
CG A:ASP393 3.9 67.8 1.0
C A:GLN395 3.9 46.1 1.0
O A:HOH714 3.9 62.9 1.0
CD1 A:LEU396 4.1 65.5 1.0
CB A:ASP389 4.2 46.6 1.0
OD2 A:ASP393 4.2 78.3 1.0
N A:LYS390 4.3 69.9 1.0
C A:ASP389 4.4 65.0 1.0
OD2 A:ASP389 4.5 38.5 1.0
N A:GLN395 4.6 57.1 1.0
N A:ASN391 4.6 71.6 1.0
O A:MET388 4.8 49.3 1.0
CA A:GLN395 4.8 46.1 1.0
N A:LEU396 4.8 43.7 1.0
CA A:LEU396 4.9 55.3 1.0
CB A:ASN391 4.9 61.6 1.0
CG A:LEU396 4.9 59.4 1.0
N A:GLY394 5.0 50.2 1.0
N A:ASP393 5.0 52.8 1.0
N A:GLY392 5.0 58.0 1.0

Reference:

A.K.Wernimont, J.R.Walker, A.Hutchinson, A.Seitova, H.He, P.Loppnau, M.Neculai, M.Amani, Y.H.Lin, M.Ravichandran, C.H.Arrowsmith, A.M.Edwards, C.Bountra, R.Hui, D.V.Lovato. Crystal Structure of CDPK4 From Plasmodium Falciparum, PF3D7_0717500 To Be Published.
Page generated: Mon Dec 14 19:24:05 2020

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