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Magnesium in PDB 4r82: The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad

Protein crystallography data

The structure of The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad, PDB code: 4r82 was solved by K.Tan, L.Bigelow, S.Clancy, G.Babnigg, C.A.Bingman, R.Yennamalli, J.Lohman, M.Ma, B.Shen, G.N.Phillips Jr., A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), Enzyme Discovery For Natural Productbiosynthesis (Natpro), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.93 / 1.66
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.046, 62.830, 70.089, 90.00, 92.06, 90.00
R / Rfree (%) 16.3 / 18.8

Other elements in 4r82:

The structure of The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad also contains other interesting chemical elements:

Calcium (Ca) 3 atoms
Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad (pdb code 4r82). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad, PDB code: 4r82:

Magnesium binding site 1 out of 1 in 4r82

Go back to Magnesium Binding Sites List in 4r82
Magnesium binding site 1 out of 1 in the The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg208

b:30.2
occ:1.00
O B:HOH425 2.1 28.0 1.0
O A:HOH306 2.2 24.5 1.0
OG1 A:THR50 2.6 26.5 1.0
OG1 B:THR50 2.6 24.7 1.0
O B:PHE49 3.2 18.4 1.0
O A:PHE49 3.2 17.4 1.0
CB A:THR50 3.6 20.4 1.0
CB B:THR50 3.6 17.0 1.0
CG2 A:THR50 3.9 19.2 1.0
CG2 B:THR50 4.0 15.8 1.0
CA A:THR50 4.0 12.6 1.0
CA B:THR50 4.0 11.8 1.0
C B:PHE49 4.0 19.4 1.0
C A:PHE49 4.0 16.1 1.0
O A:SER48 4.3 24.8 1.0
O B:SER48 4.4 20.1 1.0
N A:THR50 4.4 10.7 1.0
N B:THR50 4.4 12.2 1.0
O A:HOH319 4.4 18.0 1.0
O B:HOH342 4.4 21.6 1.0
C B:SER48 4.6 14.8 1.0
C A:SER48 4.6 19.7 1.0
O B:ASN47 4.7 13.4 1.0
O A:ASN47 4.7 12.6 1.0
CE2 B:PHE27 4.7 10.3 1.0
CE2 A:PHE27 4.7 12.6 1.0

Reference:

K.Tan, L.Bigelow, S.Clancy, G.Babnigg, C.A.Bingman, R.Yennamalli, J.Lohman, M.Ma, B.Shen, G.N.Phillips Jr., A.Joachimiak. The Crystal Structure of An Oxidoreductase (SGCE6)From Streptomyces Globisporus in Complex with Fad and Nad. To Be Published.
Page generated: Tue Aug 20 02:54:41 2024

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