Magnesium in PDB 4tnj: Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution

Enzymatic activity of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution

All present enzymatic activity of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution:
1.10.3.9;

Protein crystallography data

The structure of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution, PDB code: 4tnj was solved by J.Kern, R.Tran, R.Alonso-Mori, S.Koroidov, N.Echols, J.Hattne, M.Ibrahim, S.Gul, H.Laksmono, R.G.Sierra, R.J.Gildea, G.Han, J.Hellmich, B.Lassalle-Kaiser, R.Chatterjee, A.Brewster, C.A.Stan, C.Gloeckner, A.Lampe, D.Difiore, D.Milathianaki, A.R.Fry, M.M.Seibert, J.E.Koglin, E.Gallo, J.Uhlig, D.Sokaras, T.-C.Weng, P.H.Zwart, D.E.Skinner, M.J.Bogan, M.Messerschmidt, P.Glatzel, G.J.Williams, S.Boutet, P.D.Adams, A.Zouni, J.Messinger, N.K.Sauter, U.Bergmann, J.Yano, V.K.Yachandra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.97 / 4.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 132.298, 228.713, 307.976, 90.00, 90.00, 90.00
R / Rfree (%) 27.6 / 28.4

Other elements in 4tnj:

The structure of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution also contains other interesting chemical elements:

Manganese (Mn) 8 atoms
Iron (Fe) 6 atoms
Chlorine (Cl) 2 atoms
Calcium (Ca) 6 atoms

Magnesium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70;

Binding sites:

The binding sites of Magnesium atom in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution (pdb code 4tnj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 70 binding sites of Magnesium where determined in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution, PDB code: 4tnj:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 1 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:0.2
occ:1.00
MG A:CLA402 0.0 0.2 1.0
NB A:CLA402 2.0 0.3 1.0
ND A:CLA402 2.0 0.2 1.0
NC A:CLA402 2.1 0.2 1.0
NA A:CLA402 2.1 0.5 1.0
NE2 A:HIS198 2.9 0.8 1.0
C4D A:CLA402 2.9 0.4 1.0
C1B A:CLA402 3.0 0.4 1.0
C4A A:CLA402 3.0 0.8 1.0
C1C A:CLA402 3.1 0.7 1.0
C4B A:CLA402 3.1 0.3 1.0
C4C A:CLA402 3.1 0.3 1.0
C1A A:CLA402 3.2 0.1 1.0
C1D A:CLA402 3.2 0.7 1.0
CHB A:CLA402 3.4 0.2 1.0
CHC A:CLA402 3.4 1.0 1.0
CHA A:CLA402 3.5 0.3 1.0
CHD A:CLA402 3.5 0.8 1.0
CE1 A:HIS198 3.7 0.1 1.0
CD2 A:HIS198 4.0 0.9 1.0
CAB D:CLA405 4.1 0.7 1.0
C3D A:CLA402 4.3 1.0 1.0
C2B A:CLA402 4.3 0.6 1.0
C3B A:CLA402 4.3 0.5 1.0
C2C A:CLA402 4.3 0.2 1.0
C2D A:CLA402 4.4 0.0 1.0
C3C A:CLA402 4.4 0.3 1.0
C3A A:CLA402 4.4 0.3 1.0
C2A A:CLA402 4.5 0.7 1.0
SD A:MET183 4.7 0.7 1.0
CBB D:CLA405 4.7 0.2 1.0
ND1 A:HIS198 4.9 0.7 1.0
CBD A:CLA402 4.9 0.7 1.0
CHC D:CLA405 5.0 0.5 1.0

Magnesium binding site 2 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 2 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:0.2
occ:1.00
MG A:CLA403 0.0 0.2 1.0
NB A:CLA403 2.0 0.9 1.0
ND A:CLA403 2.0 0.6 1.0
NC A:CLA403 2.1 0.7 1.0
NA A:CLA403 2.1 0.7 1.0
C4D A:CLA403 2.9 0.5 1.0
C1B A:CLA403 3.0 0.5 1.0
C4A A:CLA403 3.0 0.7 1.0
C4B A:CLA403 3.1 0.7 1.0
C1C A:CLA403 3.1 1.0 1.0
C4C A:CLA403 3.1 0.8 1.0
C1A A:CLA403 3.2 0.0 1.0
C1D A:CLA403 3.2 0.6 1.0
CHB A:CLA403 3.4 0.2 1.0
CHC A:CLA403 3.4 0.5 1.0
CHA A:CLA403 3.5 0.7 1.0
CHD A:CLA403 3.5 0.4 1.0
CBB D:PHO401 4.1 0.5 1.0
O1A A:CLA403 4.3 0.1 1.0
C3D A:CLA403 4.3 0.3 1.0
C2B A:CLA403 4.3 0.9 1.0
C3B A:CLA403 4.3 0.9 1.0
C2C A:CLA403 4.3 0.0 1.0
C2D A:CLA403 4.4 0.8 1.0
C3C A:CLA403 4.4 0.6 1.0
C3A A:CLA403 4.4 0.0 1.0
C2A A:CLA403 4.5 0.9 1.0
C20 D:PHO401 4.8 0.5 1.0
CG2 A:THR179 4.9 0.7 1.0
CBD A:CLA403 4.9 0.0 1.0
CGA A:CLA403 5.0 0.6 1.0

Magnesium binding site 3 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 3 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg404

b:0.0
occ:1.00
MG A:CLA404 0.0 0.0 1.0
NB A:CLA404 2.0 0.9 1.0
ND A:CLA404 2.0 0.6 1.0
NC A:CLA404 2.1 0.6 1.0
NA A:CLA404 2.1 0.4 1.0
C4D A:CLA404 2.9 0.6 1.0
C1B A:CLA404 3.0 0.5 1.0
C4A A:CLA404 3.1 0.3 1.0
C4B A:CLA404 3.1 0.8 1.0
C1C A:CLA404 3.1 0.0 1.0
C4C A:CLA404 3.1 0.9 1.0
C1A A:CLA404 3.2 0.4 1.0
C1D A:CLA404 3.2 0.9 1.0
CHB A:CLA404 3.4 0.8 1.0
CHC A:CLA404 3.4 1.0 1.0
CHA A:CLA404 3.5 1.0 1.0
CHD A:CLA404 3.5 0.3 1.0
CBB D:PHO402 4.0 0.6 1.0
C3D A:CLA404 4.3 0.8 1.0
C2B A:CLA404 4.3 0.4 1.0
C3B A:CLA404 4.3 0.7 1.0
C2C A:CLA404 4.3 0.1 1.0
C2D A:CLA404 4.4 0.1 1.0
C3C A:CLA404 4.4 0.2 1.0
C3A A:CLA404 4.4 0.5 1.0
C2A A:CLA404 4.5 0.2 1.0
C20 D:PHO402 4.6 0.9 1.0
CBA A:CLA404 4.8 0.2 1.0
CE1 A:PHE206 4.9 0.5 1.0
CBD A:CLA404 4.9 0.2 1.0
CG2 D:ILE178 5.0 0.4 1.0

Magnesium binding site 4 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 4 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg405

b:1.0
occ:1.00
MG A:CLA405 0.0 1.0 1.0
NB A:CLA405 2.0 0.5 1.0
ND A:CLA405 2.0 0.1 1.0
NC A:CLA405 2.1 0.1 1.0
NA A:CLA405 2.1 0.3 1.0
NE2 A:HIS118 2.9 1.0 1.0
C4D A:CLA405 2.9 0.3 1.0
C1B A:CLA405 3.0 0.4 1.0
C4A A:CLA405 3.0 0.3 1.0
C4B A:CLA405 3.1 0.0 1.0
C1C A:CLA405 3.1 0.9 1.0
C4C A:CLA405 3.1 0.9 1.0
C1D A:CLA405 3.2 0.3 1.0
C1A A:CLA405 3.2 0.4 1.0
CHB A:CLA405 3.4 0.9 1.0
CHC A:CLA405 3.4 0.8 1.0
CHA A:CLA405 3.5 0.6 1.0
CHD A:CLA405 3.5 0.4 1.0
CE1 A:HIS118 3.6 0.9 1.0
CD2 A:HIS118 3.9 0.3 1.0
CG2 I:VAL12 4.1 0.3 1.0
C3D A:CLA405 4.3 0.5 1.0
C2B A:CLA405 4.3 0.2 1.0
C3B A:CLA405 4.3 0.5 1.0
CG1 I:VAL8 4.3 0.4 1.0
C2C A:CLA405 4.3 0.7 1.0
C2D A:CLA405 4.4 0.2 1.0
C3C A:CLA405 4.4 0.8 1.0
C3A A:CLA405 4.4 0.8 1.0
C2A A:CLA405 4.5 0.2 1.0
ND1 A:HIS118 4.7 0.2 1.0
CBD A:CLA405 4.9 0.2 1.0
CBA A:CLA405 5.0 0.0 1.0
CG A:HIS118 5.0 0.8 1.0

Magnesium binding site 5 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 5 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:0.4
occ:1.00
MG B:CLA601 0.0 0.4 1.0
NB B:CLA601 2.0 0.5 1.0
ND B:CLA601 2.0 0.9 1.0
NC B:CLA601 2.1 0.8 1.0
NA B:CLA601 2.1 0.2 1.0
C4D B:CLA601 2.9 0.2 1.0
C1B B:CLA601 3.0 0.5 1.0
C4A B:CLA601 3.1 0.8 1.0
C4B B:CLA601 3.1 0.2 1.0
C1C B:CLA601 3.1 0.1 1.0
C4C B:CLA601 3.2 0.3 1.0
C1A B:CLA601 3.2 0.8 1.0
C1D B:CLA601 3.2 0.9 1.0
CHB B:CLA601 3.4 0.1 1.0
CHC B:CLA601 3.4 0.4 1.0
CHA B:CLA601 3.5 0.1 1.0
CHD B:CLA601 3.6 0.7 1.0
O B:TRP185 3.9 0.9 1.0
C3D B:CLA601 4.3 0.8 1.0
C2B B:CLA601 4.3 0.6 1.0
C3B B:CLA601 4.3 0.2 1.0
C2C B:CLA601 4.3 0.1 1.0
C2D B:CLA601 4.4 0.3 1.0
C3C B:CLA601 4.4 0.2 1.0
C3A B:CLA601 4.4 0.4 1.0
C2A B:CLA601 4.5 0.2 1.0
CE1 B:PHE190 4.9 0.3 1.0
CBD B:CLA601 4.9 0.3 1.0

Magnesium binding site 6 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 6 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:0.5
occ:1.00
MG B:CLA602 0.0 0.5 1.0
NB B:CLA602 2.0 0.0 1.0
ND B:CLA602 2.0 0.5 1.0
NA B:CLA602 2.1 0.4 1.0
NC B:CLA602 2.1 0.9 1.0
C4D B:CLA602 2.9 0.1 1.0
NE2 B:HIS202 3.0 0.3 1.0
C1B B:CLA602 3.0 0.7 1.0
C4A B:CLA602 3.0 0.3 1.0
C4B B:CLA602 3.1 0.5 1.0
C1C B:CLA602 3.1 0.8 1.0
C4C B:CLA602 3.1 0.5 1.0
C1D B:CLA602 3.2 0.7 1.0
C1A B:CLA602 3.2 0.2 1.0
CHB B:CLA602 3.4 0.5 1.0
CHC B:CLA602 3.4 0.7 1.0
CHA B:CLA602 3.5 0.9 1.0
CHD B:CLA602 3.5 0.2 1.0
CD2 B:HIS202 3.7 0.7 1.0
CE1 B:HIS202 3.9 1.0 1.0
C7 B:CLA604 4.0 0.5 1.0
C5 B:CLA604 4.0 0.8 1.0
C3D B:CLA602 4.3 0.3 1.0
C2B B:CLA602 4.3 0.5 1.0
C3B B:CLA602 4.3 0.8 1.0
C2C B:CLA602 4.3 0.1 1.0
C2D B:CLA602 4.4 0.4 1.0
C3C B:CLA602 4.4 0.7 1.0
C3A B:CLA602 4.4 0.4 1.0
C2A B:CLA602 4.5 0.0 1.0
CE1 B:HIS201 4.6 0.8 1.0
C6 B:CLA604 4.7 0.2 1.0
CG B:HIS202 4.9 0.2 1.0
O2A B:CLA602 4.9 1.0 1.0
CBA B:CLA602 4.9 0.7 1.0
ND1 B:HIS202 4.9 0.1 1.0
CBD B:CLA602 4.9 0.2 1.0

Magnesium binding site 7 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 7 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg603

b:0.4
occ:1.00
MG B:CLA603 0.0 0.4 1.0
NB B:CLA603 2.0 0.9 1.0
ND B:CLA603 2.0 0.3 1.0
NA B:CLA603 2.1 0.8 1.0
NC B:CLA603 2.1 0.4 1.0
NE2 B:HIS455 2.9 1.0 1.0
C4D B:CLA603 2.9 0.7 1.0
C1B B:CLA603 3.0 0.0 1.0
C4A B:CLA603 3.0 0.8 1.0
C4B B:CLA603 3.1 0.8 1.0
C1C B:CLA603 3.1 0.7 1.0
C4C B:CLA603 3.2 0.1 1.0
C1D B:CLA603 3.2 1.0 1.0
C1A B:CLA603 3.2 0.7 1.0
CHB B:CLA603 3.4 0.5 1.0
CHC B:CLA603 3.4 0.5 1.0
CHA B:CLA603 3.5 0.9 1.0
CHD B:CLA603 3.5 0.3 1.0
CD2 B:HIS455 3.6 0.1 1.0
C14 B:CLA611 3.8 0.9 1.0
CE1 B:HIS455 3.9 0.6 1.0
C3D B:CLA603 4.3 0.1 1.0
C15 B:CLA611 4.3 0.7 1.0
C2B B:CLA603 4.3 0.4 1.0
C3B B:CLA603 4.3 0.9 1.0
C2C B:CLA603 4.3 0.1 1.0
C2D B:CLA603 4.4 1.0 1.0
C13 B:CLA611 4.4 0.2 1.0
C3C B:CLA603 4.4 0.2 1.0
C3A B:CLA603 4.4 0.3 1.0
C2A B:CLA603 4.5 1.0 1.0
CG B:HIS455 4.8 0.2 1.0
ND1 B:HIS455 4.9 0.5 1.0
CBD B:CLA603 5.0 0.2 1.0

Magnesium binding site 8 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 8 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg604

b:0.0
occ:1.00
MG B:CLA604 0.0 0.0 1.0
NB B:CLA604 2.0 0.9 1.0
ND B:CLA604 2.0 0.6 1.0
NC B:CLA604 2.1 0.4 1.0
NA B:CLA604 2.1 0.2 1.0
C4D B:CLA604 2.9 0.3 1.0
NE2 B:HIS100 2.9 0.6 1.0
C1B B:CLA604 3.0 0.3 1.0
C4A B:CLA604 3.0 0.7 1.0
C4B B:CLA604 3.1 0.8 1.0
C1C B:CLA604 3.1 1.0 1.0
C4C B:CLA604 3.1 0.1 1.0
C1A B:CLA604 3.2 0.4 1.0
C1D B:CLA604 3.2 0.9 1.0
CHB B:CLA604 3.4 0.2 1.0
CHC B:CLA604 3.4 0.7 1.0
CHA B:CLA604 3.5 0.8 1.0
CHD B:CLA604 3.5 0.4 1.0
CD2 B:HIS100 3.8 0.4 1.0
CE1 B:HIS100 3.9 0.0 1.0
C2 B:CLA603 3.9 0.6 1.0
C1 B:CLA603 4.1 0.4 1.0
C3D B:CLA604 4.3 0.9 1.0
C2B B:CLA604 4.3 0.9 1.0
C3B B:CLA604 4.3 0.6 1.0
C2C B:CLA604 4.3 0.3 1.0
C3C B:CLA604 4.4 0.1 1.0
C2D B:CLA604 4.4 0.1 1.0
C3A B:CLA604 4.4 0.8 1.0
C2A B:CLA604 4.5 0.2 1.0
O2A B:CLA603 4.7 0.8 1.0
O1A B:CLA603 4.7 0.2 1.0
C3 B:CLA603 4.7 0.2 1.0
CBD B:CLA604 4.9 0.8 1.0
ND1 B:HIS100 4.9 0.4 1.0
CG B:HIS100 4.9 0.3 1.0
CBA B:CLA604 5.0 0.2 1.0

Magnesium binding site 9 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 9 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg605

b:0.2
occ:1.00
MG B:CLA605 0.0 0.2 1.0
NB B:CLA605 2.0 1.0 1.0
ND B:CLA605 2.0 0.9 1.0
NC B:CLA605 2.1 0.9 1.0
NA B:CLA605 2.1 1.0 1.0
C4D B:CLA605 2.9 0.9 1.0
ND1 B:HIS157 3.0 0.7 1.0
C1B B:CLA605 3.0 0.6 1.0
C4A B:CLA605 3.0 0.3 1.0
C4B B:CLA605 3.1 0.7 1.0
C1C B:CLA605 3.1 0.5 1.0
C4C B:CLA605 3.1 0.7 1.0
C1A B:CLA605 3.2 0.7 1.0
C1D B:CLA605 3.2 0.4 1.0
CE1 B:HIS157 3.4 0.3 1.0
CHB B:CLA605 3.4 0.3 1.0
CHC B:CLA605 3.4 0.6 1.0
CHA B:CLA605 3.5 0.4 1.0
CHD B:CLA605 3.5 0.9 1.0
C5 B:LMT622 3.8 0.8 1.0
C6 B:LMT622 3.9 0.6 1.0
C4 B:LMT622 3.9 0.6 1.0
CG B:HIS157 4.2 0.3 1.0
C3D B:CLA605 4.3 0.3 1.0
C2B B:CLA605 4.3 0.7 1.0
C3B B:CLA605 4.3 0.9 1.0
C2C B:CLA605 4.3 0.1 1.0
C2D B:CLA605 4.4 0.6 1.0
C3C B:CLA605 4.4 0.1 1.0
C3A B:CLA605 4.4 0.6 1.0
C2A B:CLA605 4.5 0.1 1.0
NE2 B:HIS157 4.6 0.9 1.0
CB B:HIS157 4.8 0.9 1.0
C3 B:LMT622 4.9 0.7 1.0
CBD B:CLA605 4.9 0.7 1.0
C7 B:LMT622 5.0 0.3 1.0

Magnesium binding site 10 out of 70 in 4tnj

Go back to Magnesium Binding Sites List in 4tnj
Magnesium binding site 10 out of 70 in the Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Rt Xfel Structure of Photosystem II 500 Ms After the 2ND Illumination (2F) at 4.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg606

b:0.1
occ:1.00
MG B:CLA606 0.0 0.1 1.0
NB B:CLA606 2.0 0.8 1.0
ND B:CLA606 2.0 0.9 1.0
NA B:CLA606 2.1 0.5 1.0
NC B:CLA606 2.1 0.9 1.0
C4D B:CLA606 2.9 0.7 1.0
C1B B:CLA606 3.0 0.7 1.0
C4A B:CLA606 3.0 0.6 1.0
C4B B:CLA606 3.1 0.8 1.0
C1C B:CLA606 3.1 0.9 1.0
C4C B:CLA606 3.1 0.9 1.0
C1A B:CLA606 3.2 0.9 1.0
C1D B:CLA606 3.2 0.0 1.0
CHB B:CLA606 3.4 0.4 1.0
C30 B:LMG621 3.4 0.5 1.0
CHC B:CLA606 3.4 0.1 1.0
CHA B:CLA606 3.5 0.6 1.0
CHD B:CLA606 3.5 0.1 1.0
CE B:MET37 3.7 0.0 1.0
O10 B:LMG621 3.7 1.0 1.0
C32 B:LMG621 4.0 0.9 1.0
C28 B:LMG621 4.2 0.8 1.0
C3D B:CLA606 4.3 0.9 1.0
C2B B:CLA606 4.3 0.8 1.0
C31 B:LMG621 4.3 0.6 1.0
C3B B:CLA606 4.3 0.5 1.0
C29 B:LMG621 4.3 0.5 1.0
C2C B:CLA606 4.3 0.9 1.0
C2D B:CLA606 4.4 0.1 1.0
C3C B:CLA606 4.4 0.8 1.0
C3A B:CLA606 4.4 1.0 1.0
C2A B:CLA606 4.5 0.8 1.0
CBD B:CLA606 4.9 0.6 1.0

Reference:

J.Kern, R.Tran, R.Alonso-Mori, S.Koroidov, N.Echols, J.Hattne, M.Ibrahim, S.Gul, H.Laksmono, R.G.Sierra, R.J.Gildea, G.Han, J.Hellmich, B.Lassalle-Kaiser, R.Chatterjee, A.S.Brewster, C.A.Stan, C.Glockner, A.Lampe, D.Difiore, D.Milathianaki, A.R.Fry, M.M.Seibert, J.E.Koglin, E.Gallo, J.Uhlig, D.Sokaras, T.C.Weng, P.H.Zwart, D.E.Skinner, M.J.Bogan, M.Messerschmidt, P.Glatzel, G.J.Williams, S.Boutet, P.D.Adams, A.Zouni, J.Messinger, N.K.Sauter, U.Bergmann, J.Yano, V.K.Yachandra. Taking Snapshots of Photosynthetic Water Oxidation Using Femtosecond X-Ray Diffraction and Spectroscopy. Nat Commun V. 5 4371 2014.
ISSN: ESSN 2041-1723
PubMed: 25006873
DOI: 10.1038/NCOMMS5371
Page generated: Mon Dec 14 19:34:04 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy