Magnesium in PDB 4u07: Atp Bound to Eukaryotic Fic Domain Containing Protein

The structure of Atp Bound to Eukaryotic Fic Domain Containing Protein, PDB code: 4u07 was solved by A.R.Cole, T.D.Bunney, M.Katan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.88 / 2.64
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	71.254, 76.114, 92.189, 90.00, 107.28, 90.00
R / Rfree (%)	20.8 / 25.8

The binding sites of Magnesium atom in the Atp Bound to Eukaryotic Fic Domain Containing Protein (pdb code 4u07). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Atp Bound to Eukaryotic Fic Domain Containing Protein, PDB code: 4u07:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Atp Bound to Eukaryotic Fic Domain Containing Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp Bound to Eukaryotic Fic Domain Containing Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:65.7 occ:1.00 OD1 A:ASP367 2.0 73.0 1.0 O1A A:ATP502 2.3 55.3 1.0 O A:HOH606 2.4 50.1 1.0 O1B A:ATP502 2.8 52.9 1.0 CG A:ASP367 3.0 72.1 1.0 OD2 A:ASP367 3.5 81.7 1.0 PA A:ATP502 3.7 51.8 1.0 PB A:ATP502 4.0 49.3 1.0 O3A A:ATP502 4.0 52.0 1.0 O3G A:ATP502 4.2 68.4 1.0 O2A A:ATP502 4.3 53.4 1.0 CB A:ASP367 4.3 54.2 1.0 NH2 A:ARG371 4.7 33.2 1.0 CA A:ASP367 4.7 51.4 1.0 N A:GLY368 4.8 42.5 1.0 O3B A:ATP502 4.8 53.5 1.0 O5' A:ATP502 4.8 51.8 1.0 O2B A:ATP502 5.0 40.6 1.0

Magnesium binding site 2 out of 2 in the Atp Bound to Eukaryotic Fic Domain Containing Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atp Bound to Eukaryotic Fic Domain Containing Protein within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:70.8 occ:1.00 OD1 B:ASP367 2.2 72.5 1.0 O1B B:ATP502 2.7 67.4 1.0 CG B:ASP367 3.1 73.1 1.0 O1A B:ATP502 3.1 73.8 1.0 OD2 B:ASP367 3.2 86.2 1.0 O B:HOH604 3.8 46.3 1.0 NH2 B:ARG371 4.0 44.9 1.0 PB B:ATP502 4.0 63.6 1.0 O3A B:ATP502 4.2 63.8 1.0 PA B:ATP502 4.3 69.6 1.0 CB B:ASP367 4.5 56.4 1.0 O2G B:ATP502 4.5 93.8 1.0 O3B B:ATP502 4.9 78.7 1.0 N B:GLY368 4.9 53.2 1.0 O B:HOH608 4.9 54.0 1.0

T.D.Bunney, A.R.Cole, M.Broncel, D.Esposito, E.W.Tate, M.Katan. Crystal Structure of the Human, Fic-Domain Containing Protein Hype and Implications For Its Functions. Structure 2014.
ISSN: ISSN 0969-2126
PubMed: 25435325
DOI: 10.1016/J.STR.2014.10.007