Magnesium »
PDB 4u9h-4ukd »
4ud6 »
Magnesium in PDB 4ud6: Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase
Enzymatic activity of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase
All present enzymatic activity of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase:
1.12.2.1;
1.12.2.1;
Protein crystallography data
The structure of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase, PDB code: 4ud6
was solved by
A.Volbeda,
L.Martin,
P.-P.Liebgott,
J.C.Fontecilla-Camps,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.99 / 2.12 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 64.940, 99.560, 183.940, 90.00, 91.31, 90.00 |
| R / Rfree (%) | 15.223 / 19.594 |
Other elements in 4ud6:
The structure of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase also contains other interesting chemical elements:
| Nickel | (Ni) | 3 atoms |
| Iron | (Fe) | 36 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase
(pdb code 4ud6). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase, PDB code: 4ud6:
Jump to Magnesium binding site number: 1; 2; 3;
In total 3 binding sites of Magnesium where determined in the Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase, PDB code: 4ud6:
Jump to Magnesium binding site number: 1; 2; 3;
Magnesium binding site 1 out of 3 in 4ud6
Go back to
Magnesium Binding Sites List in 4ud6
Magnesium binding site 1 out
of 3 in the Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase within 5.0Å range:
|
Magnesium binding site 2 out of 3 in 4ud6
Go back to
Magnesium Binding Sites List in 4ud6
Magnesium binding site 2 out
of 3 in the Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase within 5.0Å range:
|
Magnesium binding site 3 out of 3 in 4ud6
Go back to
Magnesium Binding Sites List in 4ud6
Magnesium binding site 3 out
of 3 in the Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of Methylviologen-Treated Anaerobically Purified D. Fructosovorans Nife-Hydrogenase within 5.0Å range:
|
Reference:
A.Volbeda,
L.Martin,
P.-P.Liebgott,
A.L.De Lacey,
J.C.Fontecilla-Camps.
[Nife]-Hydrogenases Revisited: Nickel-Carboxamido Bond Formation in A Variant with Accrued O2-Tolerance and A Tentative Re-Interpretation of Ni-Si States. Metallomics 2015.
ISSN: ESSN 1756-591X
PubMed: 25780984
DOI: 10.1039/C4MT00309H
Page generated: Tue Aug 20 04:38:15 2024
ISSN: ESSN 1756-591X
PubMed: 25780984
DOI: 10.1039/C4MT00309H
Last articles
Zn in 9JPJZn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
