Magnesium in PDB 4uho: Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac

All present enzymatic activity of Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac:
2.6.1.18;

The structure of Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac, PDB code: 4uho was solved by M.Wilding, T.S.Peat, J.Newman, C.Scott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	89.77 / 1.24
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	62.958, 120.798, 134.170, 90.00, 90.00, 90.00
R / Rfree (%)	10.543 / 12.314

The binding sites of Magnesium atom in the Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac (pdb code 4uho). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac, PDB code: 4uho:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1449 b:6.0 occ:0.50 O A:HOH2327 2.1 7.3 1.0 O A:HOH2326 2.1 6.6 1.0 OD1 A:ASP180 2.1 6.0 1.0 CG A:ASP180 3.1 6.7 1.0 OD2 A:ASP180 3.4 8.7 1.0 O2 A:UNL1463 4.1 9.0 0.7 C6 A:UNL1463 4.1 14.1 0.7 O A:HIS181 4.2 6.9 1.0 N A:HIS181 4.3 5.5 1.0 C7 A:UNL1463 4.3 13.1 0.7 CB A:ASP180 4.5 6.2 1.0 O A:HOH2325 4.6 10.0 1.0 CD2 A:LEU211 4.7 12.9 1.0 CA A:ASP180 4.9 6.2 1.0

Magnesium binding site 2 out of 2 in the Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1450 b:13.0 occ:0.80 O A:HOH2198 2.0 19.9 1.0 O A:HOH2197 2.0 17.6 1.0 OD1 A:ASP112 2.1 11.6 1.0 O A:HOH2199 2.2 7.8 1.0 O A:HOH2210 2.2 16.8 1.0 O A:ALA104 2.2 11.5 1.0 CG A:ASP112 3.2 10.6 1.0 C A:ALA104 3.2 10.1 1.0 OD2 A:ASP112 3.5 12.8 1.0 N A:GLN105 4.0 10.0 0.5 N A:GLN105 4.0 9.8 0.5 CA A:ALA104 4.1 9.6 1.0 CA A:GLN105 4.1 10.6 0.5 CB A:ALA104 4.1 9.9 1.0 CA A:GLN105 4.1 11.8 0.5 O A:GLY109 4.1 10.8 1.0 O A:HOH2203 4.2 34.5 1.0 OG1 A:THR107 4.2 11.1 1.0 CB A:ASP112 4.4 8.6 1.0 O A:HOH2195 4.5 21.1 1.0 O A:THR107 4.5 11.5 1.0 O A:HOH2208 4.5 30.1 1.0 O A:LEU111 4.6 7.7 1.0 C A:GLN105 4.7 11.2 0.5 CA A:ASP112 4.8 7.7 1.0 C A:GLN105 4.8 11.7 0.5

M.Wilding, T.S.Peat, J.Newman, C.Scott. A Beta-Alanine Catabolism Pathway Containing A Highly Promiscuous Omega-Transaminase in the 12-Aminododecanate- Degrading Pseudomonas Sp. Strain Aac. Appl.Environ.Microbiol. V. 82 3846 2016.
ISSN: ISSN 0099-2240
PubMed: 27107110
DOI: 10.1128/AEM.00665-16