Magnesium in PDB 4uuw: Competence or Damage-Inducible Protein Cina From Thermus Thermophilus

The structure of Competence or Damage-Inducible Protein Cina From Thermus Thermophilus, PDB code: 4uuw was solved by J.Derrick, V.Karuppiah, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	52.94 / 1.98
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	73.280, 93.710, 132.820, 90.00, 90.00, 90.00
R / Rfree (%)	18.001 / 22.436

The binding sites of Magnesium atom in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus (pdb code 4uuw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus, PDB code: 4uuw:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Competence or Damage-Inducible Protein Cina From Thermus Thermophilus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:46.7 occ:1.00 O A:HOH2015 2.0 35.7 1.0 O A:HOH2049 2.2 45.8 1.0 O A:HOH2011 2.3 41.8 1.0 O A:HOH2063 2.3 38.5 1.0 O2P A:AMP400 3.4 0.1 1.0 OE2 A:GLU12 3.8 45.9 1.0 O3P A:AMP400 4.0 97.5 1.0 OE1 A:GLU12 4.2 43.1 1.0 OD1 A:ASP76 4.3 39.8 1.0 OD1 A:ASP45 4.3 34.7 1.0 P A:AMP400 4.3 95.7 1.0 OD2 A:ASP45 4.3 30.6 1.0 CD A:GLU12 4.4 47.6 1.0 N A:GLY69 4.5 32.1 1.0 CA A:GLY10 4.6 33.9 1.0 O A:VAL9 4.6 27.4 1.0 CA A:GLY69 4.6 33.5 1.0 CG A:ASP45 4.7 32.0 1.0

Magnesium binding site 2 out of 2 in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Competence or Damage-Inducible Protein Cina From Thermus Thermophilus within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:35.7 occ:1.00 O B:HOH2008 1.7 30.9 1.0 O B:HOH2031 2.1 34.6 1.0 O B:HOH2009 2.1 25.8 1.0 O B:HOH2006 2.1 25.5 1.0 O B:HOH2040 2.3 34.4 1.0 O A:HOH2145 2.4 36.8 1.0 O B:HOH2017 3.8 36.9 1.0 OD1 B:ASP76 3.9 30.4 1.0 O A:HOH2144 4.0 46.1 1.0 OD1 B:ASP45 4.1 25.2 1.0 O A:HOH2127 4.1 29.4 1.0 OD2 B:ASP45 4.1 25.9 1.0 OE1 B:GLU12 4.2 27.1 1.0 OD1 B:ASP75 4.2 34.4 1.0 OE2 B:GLU12 4.2 29.9 1.0 N B:GLY69 4.3 19.9 1.0 CA B:GLY69 4.4 24.0 1.0 CG B:ASP45 4.4 23.9 1.0 O B:VAL9 4.5 24.6 1.0 CD B:GLU12 4.7 29.8 1.0 CA B:GLY10 4.7 21.9 1.0 O B:ASP75 4.7 32.9 1.0 O A:THR208 4.8 29.0 1.0 CG B:ASP76 4.9 29.4 1.0 CD1 A:TYR209 4.9 25.5 1.0

V.Karuppiah, A.Thistlethwaite, R.Dajani, J.Warwicker, J.P.Derrick. Structure and Mechanism of the Bifunctional Cina Enzyme From Thermus Thermophilus J.Biol.Chem. 201410.1074/Jbc.M114.608448.
ISSN: ESSN 1083-351X
PubMed: 25313401