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Magnesium in PDB 4uw9: The Crystal Structural of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04

Protein crystallography data

The structure of The Crystal Structural of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04, PDB code: 4uw9 was solved by K.-H.Park, E.-J.Woo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.225 / 2.30
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 94.628, 94.628, 83.124, 90.00, 90.00, 90.00
R / Rfree (%) 18.44 / 23.85

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structural of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04 (pdb code 4uw9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structural of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04, PDB code: 4uw9:

Magnesium binding site 1 out of 1 in 4uw9

Go back to Magnesium Binding Sites List in 4uw9
Magnesium binding site 1 out of 1 in the The Crystal Structural of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structural of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1229

b:80.2
occ:1.00
OE2 A:GLU178 2.8 51.5 1.0
O A:ASP9 2.8 41.9 1.0
OD2 A:ASP7 3.2 42.7 1.0
CB A:ASP179 3.4 62.4 1.0
CG A:ASP7 3.4 40.5 1.0
N A:ASP179 3.5 56.8 1.0
CD A:GLU178 3.5 49.5 1.0
CB A:ASP7 3.6 37.8 1.0
OE1 A:GLU178 3.8 46.5 1.0
CG2 A:VAL11 3.9 38.1 1.0
CA A:ASP179 4.0 57.9 1.0
NZ A:LYS153 4.0 45.4 1.0
C A:ASP9 4.0 44.9 1.0
OD2 A:ASP179 4.2 75.8 1.0
OD1 A:ASP7 4.2 37.2 1.0
N A:ALA180 4.3 47.4 1.0
O A:HOH2001 4.3 49.7 1.0
CG A:ASP179 4.3 70.8 1.0
C A:ASP179 4.5 55.1 1.0
CA A:GLY10 4.5 37.8 1.0
C A:GLU178 4.5 49.0 1.0
CA A:GLU178 4.6 44.8 1.0
C A:GLY10 4.6 40.1 1.0
CG A:GLU178 4.7 45.1 1.0
N A:GLY10 4.7 36.3 1.0
N A:VAL11 4.7 41.4 1.0
CB A:ALA180 4.8 41.8 1.0
CA A:ASP7 4.9 35.6 1.0
CB A:VAL11 4.9 41.8 1.0
N A:PHE8 4.9 36.0 1.0
C A:ASP7 5.0 36.7 1.0
N A:ASP9 5.0 42.3 1.0

Reference:

K.-H.Park, J.-H.Jung, C.-S.Park, E.-J.Woo. Structural Features of Archaeal Beta-Phosphoglucomutase From Hyper-Thermophilic Pyrococcus Sp. Strain St 04 To Be Published.
Page generated: Tue Aug 12 00:48:27 2025

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