Magnesium in PDB 4uya: Structure of MLK4 Kinase Domain with Atpgammas

All present enzymatic activity of Structure of MLK4 Kinase Domain with Atpgammas:
2.7.11.25;

The structure of Structure of MLK4 Kinase Domain with Atpgammas, PDB code: 4uya was solved by J.A.Read, C.Brassington, H.K.Pollard, C.Phillips, I.Green, R.Overmann, M.Collier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	56.16 / 2.80
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	113.011, 35.163, 70.022, 90.00, 96.33, 90.00
R / Rfree (%)	20.1 / 26.1

The binding sites of Magnesium atom in the Structure of MLK4 Kinase Domain with Atpgammas (pdb code 4uya). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of MLK4 Kinase Domain with Atpgammas, PDB code: 4uya:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of MLK4 Kinase Domain with Atpgammas


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of MLK4 Kinase Domain with Atpgammas within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1439 b:72.2 occ:1.00 OD1 A:ASN268 2.1 72.9 1.0 O2A A:AGS1438 2.8 0.8 1.0 O3G A:AGS1438 3.0 0.9 1.0 O2B A:AGS1438 3.2 0.6 1.0 CG A:ASN268 3.3 76.5 1.0 MG A:MG1440 3.4 70.9 1.0 NZ A:LYS265 3.5 87.1 1.0 O3B A:AGS1438 3.5 0.2 1.0 PG A:AGS1438 3.8 0.8 1.0 O A:SER267 3.9 65.0 1.0 CB A:SER267 4.0 61.8 1.0 PB A:AGS1438 4.0 0.6 1.0 C A:SER267 4.0 63.2 1.0 O A:HOH2039 4.1 80.4 1.0 ND2 A:ASN268 4.1 66.8 1.0 OG A:SER267 4.1 73.1 1.0 PA A:AGS1438 4.1 0.2 1.0 N A:ASN268 4.1 56.8 1.0 CA A:ASN268 4.3 55.3 1.0 CB A:ASN268 4.4 51.8 1.0 O3A A:AGS1438 4.5 0.9 1.0 S1G A:AGS1438 4.6 0.5 1.0 CA A:SER267 4.6 57.9 1.0 CE A:LYS265 4.7 75.4 1.0 O5' A:AGS1438 4.9 0.8 1.0 C5' A:AGS1438 4.9 0.3 1.0 OD2 A:ASP289 4.9 1.0 1.0

Magnesium binding site 2 out of 2 in the Structure of MLK4 Kinase Domain with Atpgammas


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of MLK4 Kinase Domain with Atpgammas within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1440 b:70.9 occ:1.00 S1G A:AGS1438 2.2 0.5 1.0 O3G A:AGS1438 2.3 0.9 1.0 PG A:AGS1438 2.7 0.8 1.0 O A:HOH2039 3.0 80.4 1.0 NZ A:LYS265 3.0 87.1 1.0 MG A:MG1439 3.4 72.2 1.0 O3B A:AGS1438 3.8 0.2 1.0 O2B A:AGS1438 3.9 0.6 1.0 O2G A:AGS1438 4.0 0.3 1.0 CE A:LYS265 4.1 75.4 1.0 OD2 A:ASP263 4.3 79.8 1.0 PB A:AGS1438 4.4 0.6 1.0 O A:HOH2038 4.6 87.4 1.0 OD1 A:ASN268 4.7 72.9 1.0

A.A.Marusiak, N.L.Stephenson, H.Baik, E.W.Trotter, Y.Li, K.Blyth, S.Mason, P.Chapman, L.A.Puto, J.A.Read, C.Brassington, H.K.Pollard, C.Phillips, I.Green, R.Overman, M.Collier, E.Testoni, C.Miller, T.Hunter, O.J.Sansom, J.Brognard. Recurrent MLK4 Loss-of-Function Mutations Suppress Jnk Signaling to Promote Colon Tumorigenesis. Cancer Res. V. 76 724 2016.
ISSN: ISSN 0008-5472
PubMed: 26637668
DOI: 10.1158/0008-5472.CAN-15-0701-T