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Magnesium in PDB 4v02: Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus

Protein crystallography data

The structure of Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus, PDB code: 4v02 was solved by D.Ghosal, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.171 / 2.70
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 130.618, 130.618, 298.507, 90.00, 90.00, 120.00
R / Rfree (%) 18.83 / 23.57

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus (pdb code 4v02). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus, PDB code: 4v02:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4v02

Go back to Magnesium Binding Sites List in 4v02
Magnesium binding site 1 out of 2 in the Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg700

b:34.5
occ:1.00
O1B A:ATP800 2.1 37.7 1.0
O1G A:ATP800 2.3 18.1 1.0
OG1 A:THR17 2.3 42.8 1.0
CB A:THR17 3.2 30.2 1.0
PB A:ATP800 3.4 30.1 1.0
PG A:ATP800 3.5 24.9 1.0
O3B A:ATP800 3.8 33.8 1.0
O A:ILE41 3.9 38.3 1.0
OD1 A:ASP121 4.0 29.5 1.0
OD2 A:ASP121 4.0 35.5 1.0
N A:THR17 4.1 28.0 1.0
O2B A:ATP800 4.1 26.9 1.0
CG2 A:THR17 4.2 28.8 1.0
CA A:THR17 4.2 29.2 1.0
O2G A:ATP800 4.3 26.4 1.0
CG A:ASP121 4.4 38.3 1.0
O3G A:ATP800 4.5 35.4 1.0
CB A:ALA40 4.5 33.2 1.0
OD1 A:ASN45 4.5 24.9 1.0
O1A A:ATP800 4.7 33.3 1.0
O3A A:ATP800 4.7 28.3 1.0
N A:LEU43 4.7 29.0 1.0
C A:ILE41 4.8 31.2 1.0
N A:ARG44 4.9 21.6 1.0
CB A:LYS16 5.0 22.9 1.0
C A:LYS16 5.0 29.0 1.0

Magnesium binding site 2 out of 2 in 4v02

Go back to Magnesium Binding Sites List in 4v02
Magnesium binding site 2 out of 2 in the Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Minc:Mind Cell Division Protein Complex, Aquifex Aeolicus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg700

b:43.8
occ:1.00
O1G B:ATP800 1.9 41.8 1.0
OG1 B:THR17 2.1 44.6 1.0
O1B B:ATP800 2.4 43.3 1.0
PG B:ATP800 3.3 25.5 1.0
CB B:THR17 3.4 35.9 1.0
O B:ILE41 3.6 44.0 1.0
PB B:ATP800 3.7 31.4 1.0
O3B B:ATP800 3.9 30.6 1.0
OD1 B:ASP121 3.9 44.0 1.0
OD2 B:ASP121 3.9 37.8 1.0
O2G B:ATP800 4.2 36.6 1.0
CG2 B:THR17 4.2 31.0 1.0
OD1 B:ASN45 4.3 34.1 1.0
CG B:ASP121 4.3 42.0 1.0
N B:THR17 4.3 32.4 1.0
CB B:ALA40 4.4 29.7 1.0
O1A B:ATP800 4.4 37.1 1.0
O3G B:ATP800 4.4 35.2 1.0
CA B:THR17 4.4 33.7 1.0
N B:ARG44 4.5 33.5 1.0
N B:LEU43 4.6 33.4 1.0
O2B B:ATP800 4.7 38.6 1.0
C B:ILE41 4.7 38.6 1.0
O3A B:ATP800 4.9 27.9 1.0

Reference:

D.Ghosal, D.Trambaiolo, L.A.Amos, J.Lowe. Mincd Cell Division Proteins Form Alternating Copolymeric Cytomotive Filaments. Nat.Commun. V. 5 5341 2014.
ISSN: ISSN 2041-1723
PubMed: 25500731
DOI: 10.1038/NCOMMS6341
Page generated: Mon Dec 14 19:38:37 2020

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