Magnesium in PDB 4v03: Mind Cell Division Protein, Aquifex Aeolicus

The structure of Mind Cell Division Protein, Aquifex Aeolicus, PDB code: 4v03 was solved by D.Trambaiolo, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.937 / 1.90
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	36.234, 51.671, 69.085, 71.30, 89.21, 69.93
R / Rfree (%)	21.57 / 27.93

The binding sites of Magnesium atom in the Mind Cell Division Protein, Aquifex Aeolicus (pdb code 4v03). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Mind Cell Division Protein, Aquifex Aeolicus, PDB code: 4v03:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Mind Cell Division Protein, Aquifex Aeolicus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mind Cell Division Protein, Aquifex Aeolicus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:12.1 occ:1.00 OG1 A:THR17 2.0 11.4 1.0 O A:HOH2012 2.0 12.8 1.0 O A:HOH2007 2.0 19.9 1.0 O1B A:ADP303 2.1 14.7 1.0 O A:HOH2005 2.1 11.8 1.0 O A:HOH2006 2.2 14.1 1.0 CB A:THR17 3.1 14.8 1.0 PB A:ADP303 3.2 14.1 1.0 O3B A:ADP303 3.4 18.0 1.0 N A:THR17 3.8 14.9 1.0 O2A A:ADP303 4.0 14.6 1.0 OD2 A:ASP40 4.0 23.3 1.0 CA A:THR17 4.0 13.7 1.0 OD2 A:ASP121 4.1 17.0 1.0 O A:ARG44 4.1 25.0 1.0 CG2 A:THR17 4.2 16.4 1.0 O3A A:ADP303 4.2 12.6 1.0 OD1 A:ASP121 4.2 17.1 1.0 O A:HOH2004 4.3 19.2 1.0 O2B A:ADP303 4.3 18.9 1.0 PA A:ADP303 4.4 16.0 1.0 CG A:ASP121 4.6 18.4 1.0 O1A A:ADP303 4.7 14.2 1.0 CB A:LYS16 4.7 15.4 1.0 CG A:ASP40 4.8 26.5 1.0 CE A:LYS16 4.9 16.9 1.0 NZ A:LYS16 4.9 17.4 1.0 C A:LYS16 5.0 11.7 1.0 CB A:ASP40 5.0 17.1 1.0

Magnesium binding site 2 out of 2 in the Mind Cell Division Protein, Aquifex Aeolicus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mind Cell Division Protein, Aquifex Aeolicus within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:10.7 occ:1.00 O B:HOH2008 1.9 14.7 1.0 O B:HOH2005 2.0 11.7 1.0 O1B B:ADP303 2.1 14.7 1.0 OG1 B:THR17 2.1 10.7 1.0 O B:HOH2018 2.1 12.8 1.0 O B:HOH2006 2.2 16.2 1.0 CB B:THR17 3.1 13.9 1.0 PB B:ADP303 3.3 12.9 1.0 O3B B:ADP303 3.6 12.1 1.0 OD2 B:ASP40 3.9 25.9 1.0 N B:THR17 4.0 13.1 1.0 O2A B:ADP303 4.0 13.1 1.0 CA B:THR17 4.1 14.7 1.0 OD2 B:ASP121 4.1 16.3 1.0 O B:ARG44 4.2 17.1 1.0 CG2 B:THR17 4.2 19.7 1.0 OD1 B:ASP121 4.2 16.8 1.0 O B:HOH2007 4.3 17.1 1.0 O3A B:ADP303 4.3 12.6 1.0 O2B B:ADP303 4.4 14.4 1.0 PA B:ADP303 4.5 13.3 1.0 CG B:ASP121 4.6 13.1 1.0 O1A B:ADP303 4.6 15.1 1.0 CG B:ASP40 4.8 27.4 1.0 O B:HOH2004 4.8 24.3 1.0 CE B:LYS16 4.9 15.8 1.0 CB B:LYS16 4.9 14.0 1.0 NH2 B:ARG44 4.9 19.4 1.0

D.Ghosal, D.Trambaiolo, L.A.Amos, J.Lowe. Mincd Cell Division Proteins Form Alternating Copolymeric Cytomotive Filaments. Nat.Commun. V. 5 5341 2014.
ISSN: ISSN 2041-1723
PubMed: 25500731
DOI: 10.1038/NCOMMS6341