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Magnesium in PDB 4wmv: Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A

Protein crystallography data

The structure of Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A, PDB code: 4wmv was solved by M.C.Clifton, A.Moulin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.40
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 98.890, 136.070, 37.820, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 25.3

Other elements in 4wmv:

The structure of Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A also contains other interesting chemical elements:

Fluorine (F) 1 atom
Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A (pdb code 4wmv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A, PDB code: 4wmv:

Magnesium binding site 1 out of 1 in 4wmv

Go back to Magnesium Binding Sites List in 4wmv
Magnesium binding site 1 out of 1 in the Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Mbp-MCL1 Bound to Ligand 4 at 2.4A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:47.0
occ:1.00
O A:HOH509 2.3 27.6 1.0
OD1 A:ASP167 2.4 20.0 1.0
O A:HOH645 3.3 35.1 1.0
CG A:ASP167 3.5 20.6 1.0
CG A:ARG310 3.9 24.4 1.0
OD2 A:ASP167 3.9 18.1 1.0
O A:HOH516 4.0 25.4 1.0
OE1 A:GLU163 4.1 17.1 1.0
CG A:LYS166 4.4 17.4 1.0
CD A:ARG310 4.4 24.2 1.0
O A:VAL307 4.6 15.0 1.0
CB A:ASP167 4.8 17.6 1.0
N A:ASP167 4.8 20.8 1.0
O A:GLU163 4.8 25.2 1.0
CA A:ASP167 4.9 21.6 1.0

Reference:

M.C.Clifton, D.M.Dranow, A.Leed, B.Fulroth, J.W.Fairman, J.Abendroth, K.A.Atkins, E.Wallace, D.Fan, G.Xu, Z.J.Ni, D.Daniels, J.Van Drie, G.Wei, A.B.Burgin, T.R.Golub, B.K.Hubbard, M.H.Serrano-Wu. A Maltose-Binding Protein Fusion Construct Yields A Robust Crystallography Platform For MCL1. Plos One V. 10 25010 2015.
ISSN: ESSN 1932-6203
PubMed: 25909780
DOI: 10.1371/JOURNAL.PONE.0125010
Page generated: Mon Dec 14 19:42:26 2020

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