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Magnesium in PDB 4wqt: Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein)
Enzymatic activity of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein)
All present enzymatic activity of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein):
2.7.7.6;
2.7.7.6;
Protein crystallography data
The structure of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein), PDB code: 4wqt
was solved by
Y.Murayama,
S.Sekine,
S.Yokoyama,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 45.79 / 4.40 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 189.568, 263.770, 195.848, 90.00, 116.83, 90.00 |
| R / Rfree (%) | 26 / 31.3 |
Other elements in 4wqt:
The structure of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein) also contains other interesting chemical elements:
| Zinc | (Zn) | 3 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein)
(pdb code 4wqt). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein), PDB code: 4wqt:
Jump to Magnesium binding site number: 1; 2; 3;
In total 3 binding sites of Magnesium where determined in the Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein), PDB code: 4wqt:
Jump to Magnesium binding site number: 1; 2; 3;
Magnesium binding site 1 out of 3 in 4wqt
Go back to
Magnesium Binding Sites List in 4wqt
Magnesium binding site 1 out
of 3 in the Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein) within 5.0Å range:
|
Magnesium binding site 2 out of 3 in 4wqt
Go back to
Magnesium Binding Sites List in 4wqt
Magnesium binding site 2 out
of 3 in the Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein) within 5.0Å range:
|
Magnesium binding site 3 out of 3 in 4wqt
Go back to
Magnesium Binding Sites List in 4wqt
Magnesium binding site 3 out
of 3 in the Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Thermus Thermophilus Rna Polymerase Complexed with An Rna Cleavage Stimulating Factor (A Grea/GFH1 Chimeric Protein) within 5.0Å range:
|
Reference:
S.I.Sekine,
Y.Murayama,
V.Svetlov,
E.Nudler,
S.Yokoyama.
The Ratcheted and Ratchetable Structural States of Rna Polymerase Underlie Multiple Transcriptional Functions. Mol.Cell V. 57 408 2015.
ISSN: ISSN 1097-2765
PubMed: 25601758
DOI: 10.1016/J.MOLCEL.2014.12.014
Page generated: Tue Aug 20 13:55:01 2024
ISSN: ISSN 1097-2765
PubMed: 25601758
DOI: 10.1016/J.MOLCEL.2014.12.014
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