Magnesium in PDB 4wzy: Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex)

Enzymatic activity of Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex)

All present enzymatic activity of Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex):
2.7.1.175;

Protein crystallography data

The structure of Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex), PDB code: 4wzy was solved by J.Fraga, N.Empadinhas, P.J.B.Pereira, S.Macedo-Ribeiro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	47.90 / 1.71
*Space group*	P 2 2 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	62.991, 73.767, 107.426, 90.00, 90.00, 90.00
*R / R_free (%)*	17.7 / 20.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex) (pdb code 4wzy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex), PDB code: 4wzy:

Magnesium binding site 1 out of 1 in 4wzy

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Magnesium Binding Sites List in 4wzy

Magnesium binding site 1 out of 1 in the Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex)

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway (Atp Complex) within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg501 b:33.3 occ:0.59	OD2	A:ASP322	2.1	32.3	0.5
	O	A:HOH1038	2.1	37.0	0.6
	O	A:HOH1092	2.1	63.1	0.7
	OE1	A:GLN310	2.2	22.4	1.0
	OD2	A:ASP322	3.0	31.6	0.5
	CG	A:ASP322	3.1	28.0	0.5
	CD	A:GLN310	3.2	20.4	1.0
	O3A	A:ATP502	3.4	82.0	0.8
	CB	A:ASP322	3.6	19.9	0.5
	NE2	A:GLN310	3.6	22.3	1.0
	CB	A:ASP322	3.6	20.0	0.5
	CG	A:ASP322	3.8	27.4	0.5
	OD1	A:ASP322	4.2	30.5	0.5
	O	A:GLY309	4.3	18.4	1.0
	CG	A:GLN310	4.5	18.8	1.0
	O5'	A:ATP502	4.6	63.6	0.8
	O	A:HOH836	4.6	34.0	1.0
	PA	A:ATP502	4.7	0.2	0.8
	CD1	A:ILE321	4.8	25.4	1.0
	CA	A:GLN310	4.9	16.3	1.0
	OD1	A:ASP322	5.0	24.2	0.5

Reference:

J.Fraga, A.Maranha, V.Mendes, P.J.Pereira, N.Empadinhas, S.Macedo-Ribeiro. Structure of Mycobacterial Maltokinase, the Missing Link in the Essential Glge-Pathway. Sci Rep V. 5 8026 2015.
ISSN: ESSN 2045-2322
PubMed: 25619172
DOI: 10.1038/SREP08026

Page generated: Tue Aug 20 14:01:35 2024

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