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Magnesium in PDB 4xxp: Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis

Protein crystallography data

The structure of Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis, PDB code: 4xxp was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.83 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 36.030, 49.530, 55.310, 90.00, 95.21, 90.00
R / Rfree (%) 14 / 17.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis (pdb code 4xxp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis, PDB code: 4xxp:

Magnesium binding site 1 out of 1 in 4xxp

Go back to Magnesium Binding Sites List in 4xxp
Magnesium binding site 1 out of 1 in the Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:6.8
occ:1.00
OG A:SER103 2.0 8.2 1.0
O A:HOH434 2.1 7.3 1.0
O A:ASP270 2.1 6.3 1.0
O A:GLU52 2.1 7.0 1.0
OD1 A:ASP270 2.1 8.2 1.0
O A:SER103 2.1 6.8 1.0
CB A:SER103 3.1 7.7 1.0
C A:ASP270 3.1 6.0 1.0
C A:SER103 3.1 6.7 1.0
C A:GLU52 3.2 6.9 1.0
CG A:ASP270 3.3 11.0 1.0
CA A:SER103 3.6 7.3 1.0
CA A:ASP270 3.6 6.1 1.0
O A:HOH487 3.9 21.6 1.0
CA A:GLU52 3.9 7.5 1.0
CB A:ASP270 4.0 8.3 1.0
OD2 A:ASP270 4.2 11.6 1.0
N A:TRP271 4.2 5.8 1.0
CB A:GLU52 4.3 7.7 1.0
N A:PHE53 4.3 6.3 1.0
OD1 A:ASP54 4.3 12.8 1.0
N A:ASN104 4.3 6.7 1.0
CB A:PHE53 4.4 6.0 1.0
CB A:TRP271 4.4 6.1 1.0
CD1 A:TRP271 4.4 7.3 1.0
OE1 A:GLU52 4.5 8.2 1.0
C A:PHE53 4.5 6.9 1.0
O A:HOH451 4.6 26.5 1.0
CA A:TRP271 4.6 5.8 1.0
CA A:PHE53 4.6 6.4 1.0
OD1 A:ASN104 4.7 8.5 1.0
O A:PHE53 4.7 7.2 1.0
CA A:ASN104 4.8 7.0 1.0
CG A:TRP271 4.9 6.2 1.0
N A:ASP54 4.9 8.8 1.0
N A:ASP270 5.0 5.8 1.0
N A:SER103 5.0 8.1 1.0

Reference:

Ssgcid, D.M.Dranow, D.Lorimer, T.E.Edwards. Crystal Structure of An Uncharacterized Protein (RV0315 Ortholog) From Mycobacterium Paratuberculosis To Be Published.
Page generated: Mon Dec 14 19:48:42 2020

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