Magnesium in PDB 4y05: KIF2C Short LOOP2 Construct

The structure of KIF2C Short LOOP2 Construct, PDB code: 4y05 was solved by W.Wang, M.Knossow, B.Gigant, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.72 / 2.59
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	83.889, 83.889, 147.872, 90.00, 90.00, 90.00
R / Rfree (%)	19.2 / 20.4

The binding sites of Magnesium atom in the KIF2C Short LOOP2 Construct (pdb code 4y05). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the KIF2C Short LOOP2 Construct, PDB code: 4y05:

Magnesium binding site 1 out of 1 in the KIF2C Short LOOP2 Construct


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of KIF2C Short LOOP2 Construct within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg701 b:0.3 occ:1.00 OG1 A:THR355 2.0 95.6 1.0 O A:HOH815 2.2 0.1 1.0 O A:HOH814 2.2 74.6 1.0 O1B A:ADP702 2.2 92.2 1.0 CB A:THR355 3.1 90.8 1.0 PB A:ADP702 3.4 87.9 1.0 O3B A:ADP702 3.5 91.3 1.0 N A:THR355 4.0 73.7 1.0 O A:HOH825 4.0 78.2 1.0 OD2 A:ASP492 4.0 95.3 1.0 CA A:THR355 4.1 77.3 1.0 CG2 A:THR355 4.1 79.6 1.0 O1A A:ADP702 4.2 0.5 1.0 OD1 A:ASP492 4.2 84.0 1.0 O A:HOH826 4.4 80.6 1.0 O3A A:ADP702 4.4 95.3 1.0 O2B A:ADP702 4.4 81.9 1.0 CG A:ASP492 4.5 86.0 1.0 PA A:ADP702 4.7 0.8 1.0 O A:SER467 4.7 0.7 1.0 O2A A:ADP702 4.9 96.5 1.0 CE A:LYS354 4.9 71.3 1.0 OG A:SER467 5.0 0.1 1.0 CB A:LYS354 5.0 71.7 1.0

W.Wang, T.Shen, R.Guerois, F.Zhang, H.Kuerban, Y.Lv, B.Gigant, M.Knossow, C.Wang. New Insights Into the Coupling Between Microtubule Depolymerization and Atp Hydrolysis By Kinesin-13 Protein KIF2C. J.Biol.Chem. V. 290 18721 2015.
ISSN: ESSN 1083-351X
PubMed: 26055718
DOI: 10.1074/JBC.M115.646919