Magnesium in PDB 4yp9: Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue

The structure of Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue, PDB code: 4yp9 was solved by M.A.Mcdonough, S.Sattin, P.M.Gardner, C.Liu, B.G.Davis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.80 / 2.70
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	104.732, 104.732, 69.532, 90.00, 90.00, 90.00
R / Rfree (%)	16.7 / 21.9

The structure of Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue also contains other interesting chemical elements:

Calcium

(Ca)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue (pdb code 4yp9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue, PDB code: 4yp9:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:19.3 occ:1.00 O A:HOH517 2.2 11.9 1.0 O A:HOH529 2.2 15.2 1.0 OD2 A:ASP217 2.2 20.1 1.0 OD1 A:ASP217 2.7 17.0 1.0 CG A:ASP217 2.7 18.0 1.0 OH A:TYR205 3.9 16.4 1.0 CB A:ASP217 4.1 17.1 1.0 O A:HOH553 4.5 16.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Luxp in Complex with A Formose Derived Ai-2 Analogue within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:21.0 occ:1.00 O A:HOH562 2.1 14.4 1.0 O A:HOH561 2.1 14.6 1.0 O A:HOH515 2.1 18.4 1.0 O A:HOH583 2.1 14.7 1.0 O A:ILE284 3.7 16.7 1.0 O A:GLU282 3.7 15.7 1.0 CA A:GLU282 4.0 14.7 1.0 C A:GLU282 4.2 15.9 1.0 CB A:GLU282 4.4 14.2 1.0 CG A:GLU282 4.4 15.1 1.0 O A:ARG281 4.5 15.9 1.0 OD2 A:ASP305 4.5 19.0 1.0 OD1 A:ASP305 4.6 16.5 1.0 O A:HOH508 4.7 19.8 1.0 O A:ASP303 4.7 18.4 1.0 C A:ILE284 4.8 16.2 1.0 O A:GLY302 4.9 18.6 1.0 CD1 A:LEU276 5.0 14.2 1.0 CG A:ASP305 5.0 17.9 1.0

S.Sattin, M.A.Mcdonough, S.Sattin, P.M.Gardner, C.Liu, B.G.Davis. N/A N/A.