Magnesium in PDB 4yqy: Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028) (Target Efi-513936) in Its Apo Form

The structure of Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028) (Target Efi-513936) in Its Apo Form, PDB code: 4yqy was solved by U.Yadava, M.W.Vetting, N.F.Al Obaidi, R.Toro, L.L.Morisco, J.Benach, J.Koss, S.R.Wasserman, J.D.Attonito, A.Scott Glenn, S.Chamala, S.Chowdhury, J.Lafleur, J.Love, R.D.Seidel, K.L.Whalen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.41 / 1.38
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	84.795, 84.795, 126.160, 90.00, 90.00, 90.00
R / Rfree (%)	17.3 / 18.6

The binding sites of Magnesium atom in the Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028) (Target Efi-513936) in Its Apo Form (pdb code 4yqy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028) (Target Efi-513936) in Its Apo Form, PDB code: 4yqy:

Magnesium binding site 1 out of 1 in the Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028) (Target Efi-513936) in Its Apo Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028) (Target Efi-513936) in Its Apo Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg301 b:54.1 occ:1.00 O B:HOH575 2.1 35.7 1.0 O B:HOH590 2.2 45.3 1.0 O B:HOH589 2.3 37.1 1.0 O B:HOH592 2.5 27.2 1.0 O B:HOH612 2.7 40.7 1.0 O B:GLU132 4.1 21.9 1.0 OD2 B:ASP229 4.2 30.0 1.0 CA B:GLY133 4.4 16.1 1.0 O B:HOH607 4.4 29.7 1.0 OD1 B:ASP229 4.4 28.4 1.0 O B:GLY133 4.6 19.1 1.0 O B:HOH566 4.7 26.4 1.0 NZ B:LYS6 4.7 47.2 1.0 CG B:ASP229 4.7 23.9 1.0 O B:HOH490 4.9 37.1 1.0 C B:GLY133 4.9 16.1 1.0 O B:HOH496 4.9 42.1 1.0 C B:GLU132 5.0 21.4 1.0

U.Yadava, M.W.Vetting, N.F.Al Obaidi, R.Toro, L.L.Morisco, J.Benach, J.Koss, S.R.Wasserman, J.D.Attonito, A.Scott Glenn, S.Chamala, S.Chowdhury, J.Lafleur, J.Love, R.D.Seidel, K.L.Whalen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of A Putative Dehydrogenase From Sulfitobacter Sp. (COG1028, Target Efi-513936) in Its Apo Form To Be Published.