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Magnesium in PDB 4zcl: Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp

Protein crystallography data

The structure of Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp, PDB code: 4zcl was solved by H.T.Fan, J.Hahm, S.Diggs, G.Blaha, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.18 / 3.06
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 56.430, 160.010, 90.020, 90.00, 97.70, 90.00
R / Rfree (%) 23.2 / 27.1

Other elements in 4zcl:

The structure of Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp also contains other interesting chemical elements:

Cobalt (Co) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp (pdb code 4zcl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp, PDB code: 4zcl:

Magnesium binding site 1 out of 1 in 4zcl

Go back to Magnesium Binding Sites List in 4zcl
Magnesium binding site 1 out of 1 in the Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Escherichia Coli Gtpase Bipa/Typa Complexed with Gdp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1004

b:72.1
occ:1.00
O2A A:GDP1003 3.7 66.3 1.0
O3B A:GDP1003 3.8 78.7 1.0
OD1 A:ASP15 4.1 96.1 1.0
PB A:GDP1003 4.9 56.9 1.0
O1B A:GDP1003 5.0 65.7 1.0

Reference:

H.Fan, J.Hahm, S.Diggs, J.J.Perry, G.Blaha. Structural and Functional Analysis of Bipa, A Regulator of Virulence in Enteropathogenic Escherichia Coli. J.Biol.Chem. V. 290 20856 2015.
ISSN: ESSN 1083-351X
PubMed: 26163516
DOI: 10.1074/JBC.M115.659136
Page generated: Sat Sep 28 23:57:57 2024

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