Atomistry » Magnesium » PDB 4zi2-4zol » 4zi5
Atomistry »
  Magnesium »
    PDB 4zi2-4zol »
      4zi5 »

Magnesium in PDB 4zi5: Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries

Enzymatic activity of Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries

All present enzymatic activity of Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries:
3.1.8.1;

Protein crystallography data

The structure of Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries, PDB code: 4zi5 was solved by P.-Y.Colin, G.Fischer, M.Hyvonen, F.Hollfelder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.57 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.613, 73.414, 113.057, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 20.7

Other elements in 4zi5:

The structure of Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries (pdb code 4zi5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries, PDB code: 4zi5:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4zi5

Go back to Magnesium Binding Sites List in 4zi5
Magnesium binding site 1 out of 2 in the Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:24.7
occ:1.00
 O A:HOH438 2.0 19.8 1.0
O A:HOH606 2.0 25.6 1.0
O A:HOH611 2.1 25.7 1.0
O A:HOH450 2.1 23.2 1.0
O A:HOH548 2.1 18.1 1.0
O A:HOH635 2.1 26.1 1.0
O A:LYS186 4.0 16.0 1.0
O A:HOH508 4.1 20.3 1.0
O A:HOH515 4.1 13.7 1.0
O A:HOH621 4.3 26.1 1.0
O A:HOH466 4.3 25.6 1.0
O A:ILE155 4.3 14.8 1.0
O A:ASP185 4.3 19.0 1.0
O A:HOH401 4.3 17.6 0.5
O A:HOH605 4.4 37.9 1.0
O A:HOH409 4.5 28.7 1.0
C A:LYS186 4.6 16.9 1.0
CA A:VAL187 4.6 14.7 1.0
N A:VAL187 4.8 15.7 1.0
O A:HOH604 4.9 26.8 1.0

Magnesium binding site 2 out of 2 in 4zi5

Go back to Magnesium Binding Sites List in 4zi5
Magnesium binding site 2 out of 2 in the Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Dienelactone Hydrolase-Like Promiscuous Phospotriesterase P91 From Metagenomic Libraries within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:25.5
occ:1.00
 O B:HOH445 2.0 22.3 1.0
O B:HOH603 2.0 28.3 1.0
O B:HOH591 2.1 22.3 1.0
O B:HOH620 2.1 24.7 1.0
O B:HOH458 2.1 23.6 1.0
O B:HOH462 2.1 17.0 1.0
O B:LYS186 4.1 16.5 1.0
O B:HOH504 4.1 14.4 1.0
O B:HOH542 4.2 20.4 1.0
O B:HOH477 4.3 31.1 1.0
O B:ILE155 4.3 15.8 1.0
O B:HOH592 4.3 35.4 1.0
O B:ASP185 4.4 18.6 1.0
O B:HOH613 4.4 23.0 1.0
O B:HOH407 4.4 34.2 1.0
CA B:VAL187 4.6 15.6 1.0
C B:LYS186 4.6 16.7 1.0
N B:VAL187 4.9 15.7 1.0
O B:HOH589 5.0 23.1 1.0

Reference:

P.Y.Colin, B.Kintses, F.Gielen, C.M.Miton, G.Fischer, M.F.Mohamed, M.Hyvonen, D.P.Morgavi, D.B.Janssen, F.Hollfelder. Ultrahigh-Throughput Discovery of Promiscuous Enzymes By Picodroplet Functional Metagenomics. Nat Commun V. 6 10008 2015.
ISSN: ESSN 2041-1723
PubMed: 26639611
DOI: 10.1038/NCOMMS10008
Page generated: Sun Sep 29 00:02:39 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy