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Magnesium in PDB 5bn4: Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans

Enzymatic activity of Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans

All present enzymatic activity of Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans:
3.6.3.14;

Protein crystallography data

The structure of Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans, PDB code: 5bn4 was solved by S.Mohanty, C.Jobichen, V.P.R.Chichili, J.Sivaraman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.37 / 2.70
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 193.484, 193.484, 108.850, 90.00, 90.00, 120.00
R / Rfree (%) 21.5 / 26.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans (pdb code 5bn4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans, PDB code: 5bn4:

Magnesium binding site 1 out of 1 in 5bn4

Go back to Magnesium Binding Sites List in 5bn4
Magnesium binding site 1 out of 1 in the Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Unique Atp Synthase Neqa-Neqb in Complex with Anp From Nanoarcheaum Equitans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:56.7
occ:1.00
 OE1 A:GLU256 2.8 44.9 1.0
O2G A:ANP601 2.9 46.1 1.0
OE1 A:GLU252 2.9 39.0 1.0
OE2 A:GLU256 3.1 42.4 1.0
NH1 A:ARG253 3.1 36.7 1.0
O1G A:ANP601 3.1 61.9 1.0
PG A:ANP601 3.3 81.9 1.0
CD A:GLU256 3.3 31.6 1.0
CB A:GLU252 3.3 35.3 1.0
O3G A:ANP601 3.5 48.3 1.0
CD A:GLU252 3.5 37.8 1.0
OG1 A:THR230 3.5 49.9 1.0
CG A:GLU252 3.5 34.5 1.0
N A:ARG253 4.0 37.6 1.0
O A:HOH817 4.0 31.8 1.0
O B:HOH512 4.1 42.5 1.0
CZ A:ARG253 4.2 40.6 1.0
CG A:ARG253 4.2 28.8 1.0
O A:HOH701 4.3 45.8 1.0
OD2 A:ASP320 4.3 35.8 1.0
O A:HOH832 4.3 35.4 1.0
CA A:GLU252 4.3 38.5 1.0
OE2 A:GLU252 4.5 43.5 1.0
CD A:ARG253 4.6 27.7 1.0
CB A:ARG253 4.6 27.9 1.0
CB A:THR230 4.7 50.8 1.0
C A:GLU252 4.7 33.5 1.0
OD1 A:ASP320 4.7 26.8 1.0
O A:HOH825 4.8 36.2 1.0
NE A:ARG253 4.8 37.3 1.0
CG A:GLU256 4.8 27.4 1.0
N3B A:ANP601 4.9 40.3 1.0
CG A:ASP320 4.9 33.1 1.0
CA A:ARG253 4.9 30.4 1.0

Reference:

S.Mohanty, C.Jobichen, V.P.R.Chichili, A.Velazquez-Campoy, B.C.Low, C.W.V.Hogue, J.Sivaraman. Structural Basis For A Unique Atp Synthase Core Complex From Nanoarcheaum Equitans J.Biol.Chem. V. 290 27280 2015.
ISSN: ESSN 1083-351X
PubMed: 26370083
DOI: 10.1074/JBC.M115.677492
Page generated: Sun Sep 29 01:11:59 2024

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