Magnesium in PDB 5bo5: Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans

The structure of Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans, PDB code: 5bo5 was solved by S.Mohanty, C.Jobichen, V.P.R.Chichili, J.Sivaraman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.78 / 2.81
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	77.229, 155.233, 177.451, 90.00, 90.00, 90.00
R / Rfree (%)	21.6 / 25.7

The binding sites of Magnesium atom in the Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans (pdb code 5bo5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans, PDB code: 5bo5:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:66.4 occ:1.00 N A:GLY137 3.3 39.1 1.0 OG1 A:THR281 3.6 42.7 1.0 OE2 A:GLU141 3.8 73.8 1.0 O A:LEU138 4.0 50.4 1.0 CA A:GLY137 4.1 41.3 1.0 CA A:PRO136 4.2 35.3 1.0 C A:PRO136 4.2 36.5 1.0 N A:LEU138 4.3 44.4 1.0 CG2 A:THR281 4.4 41.3 1.0 O A:PRO135 4.4 44.7 1.0 C A:GLY137 4.4 47.1 1.0 CB A:THR281 4.6 33.9 1.0 OG A:SER134 4.8 46.6 1.0 CD A:GLU141 4.9 75.4 1.0

Magnesium binding site 2 out of 2 in the Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of A Unique Atp Synthase Subunit Neqb From Nanoarcheaum Equitans within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:52.2 occ:1.00 O B:SER323 3.2 41.5 1.0 O B:LEU321 3.8 46.2 1.0 CE1 B:HIS122 3.8 45.2 1.0 C B:SER323 4.4 35.0 1.0 CD1 B:LEU324 4.4 36.1 1.0 C B:LEU321 4.5 41.0 1.0 O B:LEU320 4.5 43.7 1.0 ND1 B:HIS122 4.6 45.9 1.0 CB B:LEU324 4.6 31.0 1.0 NE2 B:HIS122 4.7 36.1 1.0 CA B:LEU324 4.7 32.8 1.0 CA B:LEU321 5.0 38.9 1.0

S.Mohanty, C.Jobichen, V.P.R.Chichili, A.Velazquez-Campoy, B.C.Low, C.W.V.Hogue, J.Sivaraman. Structural Basis For A Unique Atp Synthase Core Complex From Nanoarcheaum Equitans J.Biol.Chem. V. 290 27280 2015.
ISSN: ESSN 1083-351X
PubMed: 26370083
DOI: 10.1074/JBC.M115.677492