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Magnesium in PDB 5buo: A Receptor Molecule

Protein crystallography data

The structure of A Receptor Molecule, PDB code: 5buo was solved by C.Gao, G.A.N.Crespi, M.A.Gorman, T.L.Nero, M.W.Parker, L.A.Miles, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.64 / 2.31
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.410, 103.050, 108.850, 90.00, 90.00, 90.00
R / Rfree (%) 23 / 24.1

Other elements in 5buo:

The structure of A Receptor Molecule also contains other interesting chemical elements:

Calcium (Ca) 1 atom
Zinc (Zn) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the A Receptor Molecule (pdb code 5buo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the A Receptor Molecule, PDB code: 5buo:

Magnesium binding site 1 out of 1 in 5buo

Go back to Magnesium Binding Sites List in 5buo
Magnesium binding site 1 out of 1 in the A Receptor Molecule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Receptor Molecule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg716

b:49.8
occ:1.00
O A:HOH839 2.3 61.8 1.0
ND1 A:HIS436 3.4 45.1 1.0
CA A:HIS436 3.9 37.0 1.0
CD2 A:HIS439 3.9 37.3 1.0
CB A:HIS439 3.9 34.1 1.0
CG A:HIS439 4.0 36.8 1.0
CZ A:PHE316 4.0 64.8 1.0
CE2 A:PHE316 4.0 66.8 1.0
CB A:HIS436 4.1 38.2 1.0
CG A:HIS436 4.2 42.4 1.0
O A:HIS436 4.4 40.8 1.0
CE1 A:HIS436 4.5 44.4 1.0
CG1 A:VAL379 4.5 54.6 1.0
C A:HIS436 4.7 39.9 1.0
NE2 A:HIS439 4.7 36.9 1.0
ZN A:ZN704 4.7 50.6 1.0
N A:HIS436 4.8 36.9 1.0
ND1 A:HIS439 4.9 37.8 1.0
CG2 A:VAL379 5.0 54.5 1.0

Reference:

L.A.Miles, C.Gao, G.A.N.Crespi, M.A.Gorman, T.L.Nero, M.W.Parker, L.A.Miles. N/A N/A.
Page generated: Sun Sep 29 01:44:54 2024

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