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Magnesium in PDB 5bwj: Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor

Protein crystallography data

The structure of Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor, PDB code: 5bwj was solved by W.J.Bauer, A.Luthra, G.Zhu, J.D.Radolf, M.G.Malkowski, M.J.Caimano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.66 / 2.05
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.300, 62.853, 111.808, 90.00, 101.32, 90.00
R / Rfree (%) 19.3 / 22.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor (pdb code 5bwj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor, PDB code: 5bwj:

Magnesium binding site 1 out of 1 in 5bwj

Go back to Magnesium Binding Sites List in 5bwj
Magnesium binding site 1 out of 1 in the Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:56.0
occ:1.00
O A:HOH409 2.1 71.6 1.0
OE2 A:GLU51 2.1 48.2 1.0
O A:HOH410 2.1 36.9 1.0
O A:HOH463 2.2 0.9 1.0
CD A:GLU51 3.0 45.7 1.0
OE1 A:GLU51 3.3 47.9 1.0
O A:HOH438 3.8 36.9 1.0
O A:TYR50 4.2 37.7 1.0
HA A:GLU51 4.2 42.9 1.0
HG13 B:VAL197 4.2 46.0 1.0
CG A:GLU51 4.4 40.1 1.0
O A:HOH449 4.4 61.8 1.0
HG2 A:GLU51 4.5 48.1 1.0
HG11 B:VAL197 4.6 46.0 1.0
HB3 A:GLU49 4.7 51.4 1.0
OE1 A:GLU49 4.7 53.1 1.0
CG1 B:VAL197 4.9 38.3 1.0
CA A:GLU51 5.0 35.8 1.0
HB3 A:GLU51 5.0 43.9 1.0

Reference:

W.J.Bauer, A.Luthra, G.Zhu, J.D.Radolf, M.G.Malkowski, M.J.Caimano. Structural Characterization and Modeling of the Borrelia Burgdorferi Hybrid Histidine Kinase HK1 Periplasmic Sensor: A System For Sensing Small Molecules Associated with Tick Feeding. J.Struct.Biol. V. 192 48 2015.
ISSN: ESSN 1095-8657
PubMed: 26321039
DOI: 10.1016/J.JSB.2015.08.013
Page generated: Sun Sep 29 01:45:26 2024

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