Magnesium in PDB 5bxw: X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice.

The structure of X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice., PDB code: 5bxw was solved by M.Saoji, P.J.Paukstelis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.03 / 2.15
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	25.827, 25.827, 123.080, 90.00, 90.00, 120.00
R / Rfree (%)	24.4 / 26.3

The binding sites of Magnesium atom in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice. (pdb code 5bxw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice., PDB code: 5bxw:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg101 b:74.5 occ:1.00 O5' A:DG1 3.6 58.8 1.0 N7 A:DG2 4.2 47.5 1.0 C8 A:DG1 4.4 47.9 1.0 O6 A:DG2 4.5 44.6 1.0 C2' A:DG1 4.6 54.6 1.0 C5' A:DG1 4.8 57.1 1.0 C5 A:DG2 5.0 46.1 1.0

Magnesium binding site 2 out of 2 in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg102 b:65.3 occ:1.00 O5' A:DG10 4.0 55.8 1.0 OP2 A:DG10 4.2 58.3 1.0 C2' A:DG10 4.2 48.9 1.0 C3' A:DG10 4.3 49.3 1.0 P A:DG10 4.5 60.0 1.0 OP1 A:DG10 4.7 64.0 1.0 OP1 A:DG11 4.8 48.9 1.0

M.Saoji, P.J.Paukstelis. Sequence-Dependent Structural Changes in A Self-Assembling Dna Oligonucleotide. Acta Crystallogr.,Sect.D V. 71 2471 2015.
ISSN: ESSN 1399-0047
PubMed: 26627654
DOI: 10.1107/S1399004715019598