Magnesium in PDB 5bz7: X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice.

The structure of X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice., PDB code: 5bz7 was solved by M.Saoji, P.J.Paukstelis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.53 / 2.03
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	26.013, 26.013, 122.022, 90.00, 90.00, 120.00
R / Rfree (%)	23.4 / 29.3

The binding sites of Magnesium atom in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice. (pdb code 5bz7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice., PDB code: 5bz7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg101 b:75.2 occ:1.00 O A:HOH213 2.1 64.6 1.0 OP1 A:DG13 3.7 89.5 1.0 P A:DG13 4.7 80.7 1.0 O5' A:DG13 4.8 73.3 1.0

Magnesium binding site 2 out of 2 in the X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of X-Ray Crystal Structure of A Continuously Hydrogen Bonded 14MER Dna Lattice. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg102 b:69.0 occ:1.00 C6 A:DG13 3.7 60.3 1.0 C5 A:DG13 3.8 58.3 1.0 N1 A:DG13 4.0 42.5 1.0 O6 A:DG13 4.1 60.4 1.0 C4 A:DG13 4.2 47.2 1.0 N7 A:DG13 4.2 49.8 1.0 C2 A:DG13 4.4 47.8 1.0 N3 A:DG13 4.5 40.6 1.0 C8 A:DG13 4.7 62.7 1.0 N9 A:DG13 4.7 55.9 1.0

M.Saoji, P.J.Paukstelis. Sequence-Dependent Structural Changes in A Self-Assembling Dna Oligonucleotide. Acta Crystallogr.,Sect.D V. 71 2471 2015.
ISSN: ESSN 1399-0047
PubMed: 26627654
DOI: 10.1107/S1399004715019598