Magnesium in PDB 5c2l: Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd)

Enzymatic activity of Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd)

All present enzymatic activity of Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd):
2.4.2.18;

Protein crystallography data

The structure of Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd), PDB code: 5c2l was solved by G.L.Evans, E.N.Baker, J.S.Lott, Tb Structural Genomics Consortium(Tbsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	33.09 / 2.01
*Space group*	P 2₁ 2₁ 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	79.368, 91.201, 119.865, 90.00, 90.00, 90.00
*R / R_free (%)*	21.7 / 25.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd) (pdb code 5c2l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd), PDB code: 5c2l:

Magnesium binding site 1 out of 1 in 5c2l

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Magnesium Binding Sites List in 5c2l

Magnesium binding site 1 out of 1 in the Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd)

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Magnesium Soaked Into the Active Site of Mycobacterium Tuberculosis Anthranilate Phosphoribosyltransferase (Anprt; Trpd) within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg401 b:40.5 occ:1.00	OE1	A:GLU252	2.1	41.2	1.0
	O	A:HOH505	2.1	32.0	1.0
	O	A:HOH648	2.2	38.5	1.0
	O	A:HOH509	2.3	41.3	1.0
	OD1	A:ASP251	2.4	34.2	1.0
	O	A:HOH597	2.5	34.7	1.0
	CD	A:GLU252	3.1	42.6	1.0
	CG	A:ASP251	3.2	35.7	1.0
	OD2	A:ASP251	3.4	31.4	1.0
	OG1	A:THR115	3.5	50.3	1.0
	CG	A:GLU252	3.6	40.9	1.0
	OD2	A:ASP111	3.9	39.0	1.0
	O	A:VAL113	4.1	45.4	1.0
	OE2	A:GLU252	4.2	37.0	1.0
	OD1	A:ASP111	4.3	43.8	1.0
	O	A:HOH673	4.4	24.6	1.0
	CG	A:ASP111	4.5	41.6	1.0
	CB	A:ASP251	4.7	34.1	1.0
	CB	A:THR115	4.7	42.1	1.0
	CG2	A:THR115	4.8	44.7	1.0
	O	A:ASP251	4.8	34.2	1.0
	O	A:HOH638	4.9	33.3	1.0
	C	A:ASP251	4.9	34.8	1.0
	CA	A:GLY109	5.0	32.6	1.0

Reference:

G.L.Evans, E.N.Baker, J.S.Lott. Binding and Mimicking of the Phosphate-Rich Substrate, Prpp To Be Published.

Page generated: Mon Dec 14 20:05:25 2020

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