Magnesium in PDB 5c6t: Crystal Structure of Hcmv Glycoprotein B in Complex with 1G2 Fab

The structure of Crystal Structure of Hcmv Glycoprotein B in Complex with 1G2 Fab, PDB code: 5c6t was solved by S.Chandramouli, C.Ciferri, E.C.Settembre, A.Carfi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.98 / 3.60
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	176.486, 176.486, 176.486, 90.00, 90.00, 90.00
R / Rfree (%)	21.2 / 26

The binding sites of Magnesium atom in the Crystal Structure of Hcmv Glycoprotein B in Complex with 1G2 Fab (pdb code 5c6t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Hcmv Glycoprotein B in Complex with 1G2 Fab, PDB code: 5c6t:

Magnesium binding site 1 out of 1 in the Crystal Structure of Hcmv Glycoprotein B in Complex with 1G2 Fab


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Hcmv Glycoprotein B in Complex with 1G2 Fab within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1011 b:99.7 occ:0.33 OD2 A:ASP509 2.1 0.9 1.0 OD1 A:ASP509 2.1 98.2 1.0 CG A:ASP509 2.4 0.6 1.0 CB A:ASP509 3.9 89.7 1.0 CG2 A:THR513 4.7 96.5 1.0

S.Chandramouli, C.Ciferri, P.A.Nikitin, S.Calo, R.Gerrein, K.Balabanis, J.Monroe, C.Hebner, A.E.Lilja, E.C.Settembre, A.Carfi. Structure of Hcmv Glycoprotein B in the Postfusion Conformation Bound to A Neutralizing Human Antibody. Nat Commun V. 6 8176 2015.
ISSN: ESSN 2041-1723
PubMed: 26365435
DOI: 10.1038/NCOMMS9176