Magnesium in PDB 5c9h: Structural Basis of Template Boundary Definition in Tetrahymena Telomerase

Enzymatic activity of Structural Basis of Template Boundary Definition in Tetrahymena Telomerase

All present enzymatic activity of Structural Basis of Template Boundary Definition in Tetrahymena Telomerase:
2.7.7.49;

Protein crystallography data

The structure of Structural Basis of Template Boundary Definition in Tetrahymena Telomerase, PDB code: 5c9h was solved by L.I.Jansson, B.M.Akiyama, A.Ooms, C.Lu, S.M.Rubin, M.D.Stone, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.51 / 3.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.530, 117.770, 131.180, 90.00, 90.00, 90.00
R / Rfree (%) 23.9 / 29

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structural Basis of Template Boundary Definition in Tetrahymena Telomerase (pdb code 5c9h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structural Basis of Template Boundary Definition in Tetrahymena Telomerase, PDB code: 5c9h:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 5c9h

Go back to Magnesium Binding Sites List in 5c9h
Magnesium binding site 1 out of 2 in the Structural Basis of Template Boundary Definition in Tetrahymena Telomerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural Basis of Template Boundary Definition in Tetrahymena Telomerase within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg101

b:46.4
occ:1.00
O C:HOH201 2.3 42.0 1.0
O C:HOH202 2.3 55.4 1.0
O6 C:G8 3.3 63.0 1.0
N7 C:G8 3.7 53.5 1.0
C6 C:G8 4.1 48.5 1.0
C5 C:G8 4.3 45.3 1.0
O4 C:U9 4.6 42.7 1.0
N7 C:A7 4.6 42.5 1.0
C8 C:G8 4.9 62.3 1.0
N6 C:A7 5.0 33.5 1.0

Magnesium binding site 2 out of 2 in 5c9h

Go back to Magnesium Binding Sites List in 5c9h
Magnesium binding site 2 out of 2 in the Structural Basis of Template Boundary Definition in Tetrahymena Telomerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structural Basis of Template Boundary Definition in Tetrahymena Telomerase within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg101

b:84.7
occ:1.00
O G:HOH201 2.1 89.4 1.0
O6 G:G3 4.3 82.3 1.0
N7 G:G3 5.0 95.2 1.0

Reference:

L.I.Jansson, B.M.Akiyama, A.Ooms, C.Lu, S.M.Rubin, M.D.Stone. Structural Basis of Template-Boundary Definition in Tetrahymena Telomerase. Nat.Struct.Mol.Biol. V. 22 883 2015.
ISSN: ESSN 1545-9985
PubMed: 26436828
DOI: 10.1038/NSMB.3101
Page generated: Mon Dec 14 20:06:01 2020

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