Magnesium in PDB 5chz: Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch

The structure of Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch, PDB code: 5chz was solved by H.Ouzon-Shubeita, Y.-L.Lin, S.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.91 / 1.83
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	41.886, 54.875, 104.522, 90.00, 90.00, 90.00
R / Rfree (%)	17.4 / 20.9

The binding sites of Magnesium atom in the Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch (pdb code 5chz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch, PDB code: 5chz:

Magnesium binding site 1 out of 1 in the Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:21.9 occ:1.00 O A:LEU534 2.3 21.1 1.0 O A:ILE532 2.3 19.1 1.0 O A:ILE537 2.4 18.5 1.0 O B:HOH117 2.5 26.9 1.0 O B:HOH103 2.6 21.8 1.0 OP1 B:DA10 2.7 19.5 1.0 C A:LEU534 3.3 21.4 1.0 C A:ILE532 3.3 20.4 1.0 C A:ILE537 3.5 18.4 1.0 P B:DA10 3.7 20.3 1.0 OP2 B:DA10 3.9 19.9 1.0 N A:LEU534 3.9 19.3 1.0 CA A:ILE532 3.9 18.9 1.0 N A:ILE537 3.9 16.0 1.0 N A:HIS535 4.2 23.1 1.0 C A:GLU533 4.2 23.0 1.0 CA A:ILE537 4.3 15.2 1.0 CA A:LEU534 4.3 19.0 1.0 N A:GLY536 4.3 19.5 1.0 CG1 A:ILE532 4.3 23.0 1.0 CA A:HIS535 4.3 23.2 1.0 N A:GLU533 4.4 19.5 1.0 O A:PRO531 4.4 17.7 1.0 N A:GLY538 4.5 18.9 1.0 CB A:ILE537 4.6 16.2 1.0 C A:HIS535 4.6 21.7 1.0 O3' B:DC9 4.7 18.9 1.0 CA A:GLU533 4.7 23.1 1.0 O A:GLU533 4.8 22.1 1.0 CB A:ILE532 4.8 22.0 1.0 CA A:GLY538 4.8 19.2 1.0 O B:HOH118 4.9 43.0 1.0 C A:GLY536 4.9 15.3 1.0 O5' B:DA10 5.0 19.5 1.0

H.Ouzon-Shubeita, Y.-L.Lin, S.Lee. Structure of Wild-Type Human MBD4 Bound to A G:T Mismatch To Be Published.