Magnesium in PDB 5dk4: Crystal Structure Analysis of Tryptophanyl-Trna Synthetase From Bacillus Stearothermophilus in Complex with Indolmycin and Mg*Atp

Enzymatic activity of Crystal Structure Analysis of Tryptophanyl-Trna Synthetase From Bacillus Stearothermophilus in Complex with Indolmycin and Mg*Atp

Protein crystallography data

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 5dk4

Magnesium Binding Sites List in 5dk4

Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of Tryptophanyl-Trna Synthetase From Bacillus Stearothermophilus in Complex with Indolmycin and Mg*Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of Tryptophanyl-Trna Synthetase From Bacillus Stearothermophilus in Complex with Indolmycin and Mg*Atp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:23.4 occ:1.00 O A:HOH589 2.0 29.5 1.0 O A:HOH525 2.1 23.5 1.0 O A:HOH591 2.1 28.6 1.0 O2A A:ATP401 2.2 19.5 1.0 O3G A:ATP401 2.2 19.7 1.0 O2B A:ATP401 2.2 19.2 1.0 HE21 A:GLN9 3.2 23.9 1.0 PB A:ATP401 3.3 19.4 1.0 PA A:ATP401 3.4 19.6 1.0 PG A:ATP401 3.5 20.0 1.0 HE22 A:GLN9 3.5 23.9 1.0 HZ2 A:LYS192 3.5 24.9 1.0 O3B A:ATP401 3.6 18.3 1.0 O06 A:5BX404 3.7 25.5 1.0 NE2 A:GLN9 3.7 19.9 1.0 HZ1 A:LYS111 3.7 58.9 1.0 O3A A:ATP401 3.8 21.3 1.0 O A:HOH619 3.9 27.9 1.0 N04 A:5BX404 3.9 26.6 1.0 O A:HOH541 4.0 37.5 1.0 H8 A:ATP401 4.1 30.9 1.0 O5' A:ATP401 4.1 20.6 1.0 C05 A:5BX404 4.2 30.6 1.0 HE2 A:LYS192 4.2 29.6 1.0 OD2 A:ASP146 4.3 31.0 1.0 NZ A:LYS192 4.3 20.8 1.0 O1G A:ATP401 4.4 21.8 1.0 O2G A:ATP401 4.5 18.1 1.0 NZ A:LYS111 4.6 49.1 1.0 HE3 A:LYS192 4.6 29.6 1.0 HZ1 A:LYS192 4.6 24.9 1.0 CE A:LYS192 4.6 24.6 1.0 O1B A:ATP401 4.7 18.5 1.0 O1A A:ATP401 4.7 17.7 1.0 H2' A:ATP401 4.7 24.7 1.0 HE21 A:GLN147 4.7 45.1 1.0 HE2 A:LYS111 4.8 76.5 1.0 HE22 A:GLN147 4.9 45.1 1.0 HZ3 A:LYS111 4.9 58.9 1.0 NE2 A:GLN147 5.0 37.6 1.0 HZ3 A:LYS192 5.0 24.9 1.0 CD A:GLN9 5.0 22.1 1.0

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